Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | VFIKCVLYWEQKTDWLYPLLILENEENKIKFMQFLCYYVKTLSVKEQQKFWTAWLSVFLRERPKMGEITAREYVMLLRIILYMDEILEKGLCIMSRAFSSVHGKCAGEEMKQLLIEMLHKKESMKAHKEIFANVFFILLQTCHEAVLFEKEVIKIKELLVQYEVEEYVLHLLENEI |
1 | 3c2hB1 | 0.09 | 0.09 | 3.41 | 0.80 | SPARKS-K | | -----MNITQAAEQAIRLWFNTPDPMQRLHMAKTIRTWIRQVDQANMPNCVQQILNIIYDGLKPQPVLPISYYAQLWYNLLDILRRFSPYIHQVVQMFCPREN--GPQDFRELICNLWQKDPHMKHCANQVFQIFNCIIMGVKLRTEFAQHLEKLVGTLSEYFVHNPAIFIIFRFI |
2 | 6emfA | 0.12 | 0.10 | 3.62 | 0.93 | FFAS-3D | | --------WK---GLFYALWMCDRAIPQQNLCNELADLIWQLPRESVATWLRGFWATMAREWTGIDVLRMEKFLLLVRRVLGAQSKVDEVLGLLAEWPFSLAEEVRILHVLDIWVDEVEREEEARMIVQRISDMVDALEQTTKS----PAVRTRSKDSLGDDRLPAN--------- |
3 | 4k51A | 0.11 | 0.07 | 2.68 | 0.26 | HHpred | | -------------------------------------------ENLVKVFFVAWKKFYKLYSTNPR-ATEEEFKTYSSTIFLSQLDYDPHLRMYRLNLDAKP------TRKEMLQSIIEDESIYGKVDEELKEL-YDIIEVNFDVDTVKQQLENLLVKLSSKTFSQYI-APLR--- |
4 | 5d5hA3 | 0.13 | 0.12 | 4.34 | 0.69 | MUSTER | | LYGYEVSPVLWKKVQSVATRIIVARERDRMAFNPPARYTEASLVKALEELGIGRPSTYSSIIKT---IQDRGYVHKKGSALVPSWVAFAVTGLLEQHFGRLVDYDFTAAMEDELDEIAAGNERRTNWLNNFYFGGDHGVPDSVARSGGLKKLVGINLE----GIDAREVNSIKRPI |
5 | 3gb8A | 0.06 | 0.05 | 2.23 | 0.73 | CNFpred | | ---------------CQFVMENSNAPLVHATLETLLRFLNWIPLGYIFKLISTLIYKFLNVP----MFRNVSLKCLTEIAG-FVTLFTLTMMQLKQMLPL-------TNIRLAYSNGKDEQNFIQNLSLFLCTFLKEHDQLIEKRLNLRETLMEALHYMLLVSIFKICLEYWNHLA |
6 | 1vt4I | 0.14 | 0.14 | 4.83 | 0.60 | HHsearch-2 | | CKILLTTRFKQVTDFLSAASMTTPDEVKSLLLKYLPREVLTTNPRRLSIIWDNWKHVNCTTIIESNVLEPAEYRKMFDRLSVFDVIKSDVMVVVNKLVEK-QPKESTISIPSIYLELENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERFLERIALMA |
7 | 5cwjA | 0.10 | 0.09 | 3.17 | 0.83 | Neff-PPAS | | ----------------------DSEEEQERIRRILKEARKSGTEESLRQAIEDVAQLAKKSQDSEVLEEAIRVILRIAKESGSEEALRQAIRAVAEIAKEAQDSEVLEEAIRVILRIAKESGS-EEALRQAIRAVAEIAKEAQDPRVLEEAIRVIRQIAEESGSEEARRQAERAEE |
8 | 4iv9A2 | 0.15 | 0.09 | 2.88 | 0.52 | HHsearch | | HYRGKRYHWPAGKK-PPELFRRVYEGWQS-LLLDITAMLKSGRLEEAAIAWQGWLNVF-RD-----------------------CSFYNAIVCIFTGRHPPGGDRARPEDFELFGSL-GSGGFLPVFQA----------------------------------------------- |
9 | 5h7cA3 | 0.11 | 0.10 | 3.73 | 0.62 | SP3 | | ---DSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTDSELVNEIVKQLAEVAKE-ATDKELVIYIVKILAELAKQSTELVNEIVKQLEEVAKEATDKELVEHIEKILEELEQQSYEILSLPNLNEEQRNAFIQSLKDDPSQSANLLAEAKSLNVNQAVKQLAEKAKEA- |
10 | 5h7cA3 | 0.11 | 0.11 | 3.86 | 0.67 | PROSPECTOR2 | | ---DSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTDSELVNEIVKQLAEVAKE-----ATDKELVIYIVKILAELSELVNEIVKQLEEVAKEATDKELVEHIEKILEELEQQFYEILSLPNLNEEQRNAFIQSLKDDPSQSANLLAEAKSLNVNQAVKQ-LAEKAKEA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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