Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | QNKKLYIVLLFALQIFACFTLSLFSTIGSVLLPFFFLLLYIKEDTSPYQKLGGGFIWFCFSIFLNSKFPSLFEAGLFALHILLTLWITSLNRNQQMLRVISITAIGVASFLIIPLLPYMRTILSYILYWVAFGFGYVLNPILEILLGMDRSKADEYVSKLGYGETPPLPDQKEYNPLVLQVITIIIIFLITAYI |
1 | 4hkrA | 0.11 | 0.08 | 2.79 | 1.09 | FFAS-3D | | ----SGFAMVAMVEVMLIAFAICTTLLVAVHMLALMISTCILPNPHERLHWYIETAWAFSTLL---------GLILFLLEIAILCWVKFYDLSRRAAWSATVVLIPVMIIFMAFAIHFYRSLVSHKYEVTV-------SGIRELEMLKEQMEQDHL-------------------------------------- |
2 | 3rkoB | 0.11 | 0.10 | 3.55 | 1.09 | CNFpred | | NMLMWATLMLLGGAVGKSAQLPLQTWLADAMPTPVSALIHAA-----TMVTAGVYLIARTHGLFLM-TPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGL-------------KSIPLVYLCFLVGGAALSALPL |
3 | 5mqfT | 0.15 | 0.13 | 4.54 | 0.90 | SPARKS-K | | KKSINGLINKVNISIIIQELLQENIVRGRGLLSRSVLQAQSASP-------IFTHVYAALVAIINSKFP---QIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLTQVSPNAIFERLRNILHESEID-----KRVQYMIEVMFAVRKFRRTIYL |
4 | 4q65A2 | 0.14 | 0.13 | 4.37 | 1.07 | FFAS-3D | | NQKQRELGLIVTLTFFSMLFWAFAQQGGSSIS---LYIDRFVNTVPTMFQSINAFAVMLCGVFLAWVVNALGLGLMSAGFCILTLSARWSAMYGLPLMVLGLAVMGFAELFIDPVMSQITGVLTGIYMLLSGAIANYLAGVIADQTSSINAYIEVFDQ-----------------ITWGALACVGVVLMIWLY- |
5 | 6nbqF | 0.14 | 0.11 | 3.90 | 0.32 | HHpred | | --------------------IDPLAALMLVIVTTVAFLVMMAHDPG-YVRFFAYLSLFGSSMLVSPNLVQFWELVGMCSYLLIGFWYDRKSAAEAAQKAFVTNRVGDFGLLLGMVGLFWATGTFDFAGMG--------DRLTELVNTGLLSPSLAAILALGVAKSAQLPDAMEG-PTPISAATMVAAGVFLI-- |
6 | 5kbwA | 0.13 | 0.11 | 3.73 | 0.90 | MUSTER | | ---------SSIKKISFVGIFSALATLVMFLFPIFPQA-----SFLKYD--PSEIPALIVSFLL-----PGVGMFVVLVKDILFFLMKSGDPVGIAMNAVLGMSFVGIAGLIYHRNKRATAIKGMIVATLFATAFALGLNALIVPLYFEA-PFELYLKFF---------------ILAFNLVKFGIDSVVTFFV |
7 | 4he8F | 0.08 | 0.07 | 2.70 | 1.04 | CNFpred | | PDLLALAGLLLFLGAVGKSAQIPLMVWLMAGPTPVSALIHAA-----TMVTAGVYLIARSSFLYSVLPDVSYAIAVVGLLTAAYGALSAQTDIKKIVAYSTISQLGYMFLAAGVGAYWVALFHVFTHAFFKALLFLASGSVIHALG--GEQDVRKMGGL---------------LPQTRWHALIGALALGGLPL |
8 | 4l6vK | 0.15 | 0.02 | 0.70 | 0.51 | HHsearch-2 | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------QASPTTAGWSLSV--GIIMCLCNVFAFVI |
9 | 3o7pA2 | 0.11 | 0.10 | 3.55 | 0.89 | Neff-PPAS | | --FSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEPGMTAGFAANYLTGTMVCFFIGRFFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAGNI----------------PTAELIPALCFAVIFIFARFR |
10 | 2y69Z | 0.17 | 0.04 | 1.19 | 0.30 | HHsearch | | -----------------------------------ITAKPAKTPTSPKEQAIGLSVTFLSFLL-----PAGWVLYHLD----------NYKK------------------------------------------------------------------------------------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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