Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | LSFLIIPTFLVIGYLLRVVRATMRGDEEPPEFDEWGDMLVDGLKGFAIAFVYFLIPAIVALVFGFAGLIGIVAGGGSDAAGAFGGIVTLLGLLVAFVLSLAAAYLVPAALANYAETDRLGAGFDFGTLRPILTSGKYATAWLTAFVVLFAASLVVGILN |
1 | 4aw6A | 0.14 | 0.13 | 4.53 | 1.26 | SPARKS-K | | LLFSWTVYLWETFLAQRQRRIYKTTTHVPPELGQIRLYQLDKSTFSFWSGLYSETEGTLILLFGGIPYLWRLSGRP----EYEITQSLVFLLLATLFSALAGLPWSLYNTFVIEEKHGFNQ-QTLGFFMKDAIKKFVVTQCILLPVSSLLLYIIKIGGD |
2 | 4av3A3 | 0.12 | 0.11 | 3.96 | 1.07 | FFAS-3D | | AALFFLIPLVALGFAAANFAAVVRKPET-ERMKEISSYIRSGADSFLAHETKAIFKVAIVIAILLMIFTTWQ--------TGVAFLLGAVMSASAGIVGMKMATRANVRVAEAARTTK-----KIGPALKVAYQGGSVMGLSVGGFALLGLVLVYLIF- |
3 | 3vvnA2 | 0.04 | 0.04 | 1.96 | 1.06 | Neff-PPAS | | MLGIVPILGMAAATTSVTGAAYGERN---------VEKLETAYLYAIKIAFMIELAVVAFIMLFAPQVAYLFTAQVIKGDLISALRTLPVFLVLTPFGMMTSAMFQGIGEGEKSLILTIFRTLVMQVGFAYIFVHYTTLGLRGVWIGIVIGNMVAAIVG |
4 | 5t4oK | 0.10 | 0.10 | 3.70 | 1.23 | SPARKS-K | | MFFSVVLGLLFLVLFRSVAKKATSGVPG--KFQTAIELVIGFVNGSVKDMYIAPLALTIFVWVFLMNLMDLLPIDVVPSADVNVTLSMALGVFILILFYSIKMKLQPFNNLILEGVSLLSKPVSGLRLFGNMYAGELIFILIAGLWSQWILNVPWAIFH |
5 | 1pw4A2 | 0.08 | 0.08 | 3.02 | 1.05 | FFAS-3D | | LPNKLLWYIAIANVFVYLLRYGI--LDWSPTYLKEVALDKSSWAYFLYEYAGIPGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALETAAGFTGLFGYLGGSVAASAIVGYTVDFGWDGGFMVMIGGSILAVILLIVV- |
6 | 4av3A | 0.11 | 0.10 | 3.60 | 0.26 | HHpred | | AALFFLIPLVALGFAAANFAAVVRKP-ETERMKEISSYIRSGADSFLAHE-TKAIFKVAIVIAILLMI---FT---TW----QTGVAFLLGAVMSASAGIVGMKMATRANVRVAERKKIGPALKVA--YQGGSVMGLSVGGFALLGLVLVYLIF----- |
7 | 6cc4A4 | 0.12 | 0.11 | 3.97 | 0.92 | MUSTER | | FPSGVLGVALGTILLPSLSKSFASGNH-----DEYNRLMDWGLRLCFLLALPSAVALGILSGPLTVSLFQ--YGKFTAFDALMTQRALIAYSWMAFLLRLVVAVLVMSGVLLGMLHIM-------PEWSLGTMPWRLLRLMAVVLAGIAAYFAALAVLG |
8 | 5gpjA | 0.12 | 0.11 | 3.77 | 0.99 | CNFpred | | --SGAVMGFLLAANGLLVLYIAIN------LFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVG-RNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVAS-------ISSFGLNH--ELTAMLYPLIVSSVGILVCLLTTLFA |
9 | 6d9zF | 0.13 | 0.13 | 4.35 | 0.60 | HHsearch-2 | | INLILFIIGFAINQFSHWVDWL---MPSLPEWLSFLQFILWPLFVTLVLLIVFFTFTLIANLIAAPFNAEKVERGTFSWAELIGELYFLPRAIALFIWLLFGVWMMAVQYIDYPA---DNHKLGWNEMLAWLRRWACMGFGGITYLVLLI-PLVNMPAA |
10 | 5xjjA2 | 0.10 | 0.09 | 3.50 | 1.02 | Neff-PPAS | | TLHYVISSGVAAAVSTRVSNNLGAG--------NPQVARVSVLAGLCLWLVESAFFSILLFTFRNIIGYAFSNSKEVVDYVADLSPLLCLSFILDGFTAVLNGVARGSGWQHIGAWNNIFSYYLVGAPVGVYLAFRHDLNGKGLWCGVVIGSTVQATVL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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