Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | VFISGIGFLGYVLIKLVGPRRGVGLTGLLGGLASSTAVTLSFTQRSRHAPGLARPFAVAILLAWTIMFFRVIVEVAVVHAALLSRLWLPMTAGAGAALAYTIYLYLTASSRQQEEEDNLKNPFELGPAITFGLLYAVILLVANAAQMYLGDTGVYLSSLVSGVADVDAITLSMAELTRQGNLTEDVATRAIVLAVIANTLVKGGLVLSTG |
1 | 4fc4A | 0.12 | 0.12 | 4.17 | 1.14 | SPARKS-K | | TINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIILIFTLGN-LLDPSVRPLVMGATIALTLVIIHTMFLTLGVKAQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTS---------IVHSVALAKTTVCLAIWMAIKFLAIWWCLLAFIASGYSVANMTLFALSWFGHHSAYTLAGIGHNLLWVTLGNTLSGVVMGLGYW |
2 | 6fv6A1 | 0.10 | 0.09 | 3.19 | 1.17 | FFAS-3D | | -----LYTVENMISMILVSSISVAATGFSLSLLWYSGTNILIAQFVGAKKDPSPILINGLFLSFLISLPLFFYGKDFVLAKEYLTPIFWFIPIGFLTNTFYGAYNGAGDTK---------------TPMKVAIIMNLTHIGTAYTLINLGVEGAGWGIAISEI-----LAFFIYTFLLIFFLEPKLLFKMVRLGTPT-ALERAITTLSFN |
3 | 5y50A1 | 0.11 | 0.10 | 3.78 | 1.02 | MUSTER | | SYIAGAMIAVNSSMYVL----QVISIMMVGHLGELFLSSTAIAVSFCS--VTGFSVVFGLASALETLCGQANGAYEKLGVHTYTGIVSLFLVCIPLSLLWTYIGDILSLIGQDAMVAQE-----AGKFATWLIPALFGYATLQPLVRFFQAQSLILPLVMSSVSSLCIHIVLCWSLVFKFGLGSLGAAIAIGVSYWLNVTVLGLYMTFSS |
4 | 5gpjA | 0.11 | 0.10 | 3.59 | 1.09 | CNFpred | | --KPALATAIFSTVSFLLGGVTSLVSGFLGMKIATYANARTTLEAR----KGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKWGGLFEAITGYGLGGSSM------------------ALFGRVGGGIYTKAAAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGNHELTAMLYPLIVSSVGILVCLLTTLFATD |
5 | 5y50A1 | 0.11 | 0.10 | 3.65 | 1.07 | Neff-PPAS | | -----------GFLRETKKLSYIAGAMIAVNSSMYVLQVISIMMVGHLGELFLSSTAIAVSFCSVTGFSVVFGLASALEYEKLGVHTYTGIVSLFLVCIPLSLLWTYIGDILSLIGQDAMVAQEAGKFATWLIPALFGYATLQPLVRFFQAQSLILPLVMSSVSSLCIHIVLCWSLVFKFGLGSLGAAIAIGVSYWLNVTVLGLYMTFSS |
6 | 3tdoA | 0.11 | 0.10 | 3.79 | 1.10 | SPARKS-K | | TLDKLTNAAINKINLLNTSKVKYLVSSAFAGLYVGIGILLIFTIGGLLTPMTKIVMGLSFAIALSLVIMTMVMSAGMLNKDTSKIWAYSWVGNLIGALVLGIIFVGTGLVDKGP---------VAEFFANTAASKASVCVSVLCSFRIIMIFLCLFAFITSGFSVANMTIYSVSLFSPTSTVTIGGAIYNLVAVTLGNIVGGALMGLGTY |
7 | 5tjvA1 | 0.13 | 0.13 | 4.59 | 1.15 | FFAS-3D | | LTLGTFTVLENLLVSLRCRPSYHFIGSLAVALGSVIFVYSFIDFHVFHRKDSRNVFLFKLGGVTASFTASVGSLFLAAIDRYISIVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILIRLAKTLVLILVVLIICWGPLLAIMVYDMNKLIKTVFAFCSMLCLLNSTVNPIIYALR-- |
8 | 3vvnA2 | 0.11 | 0.10 | 3.63 | 1.00 | MUSTER | | LRVGLPSSLSQLSMSIAM----FFLNSVAITAGENGVAVFTSAWRITM---LGIVPILGMAAATTSVTGAAYGEVEKLETAYLYAIKIAFMIELAVVAFIMLFAPQVAYLFTAQVIKGD-----LISALRVFLVLTPFGMMTSAMFQGIGEGEKSLILTIFRTLVMQVGFAYIFVH--YTTLGLRGVWIGIVIGNMVAAIVGFLWGRMRI |
9 | 3rkoB | 0.12 | 0.11 | 3.87 | 1.08 | CNFpred | | MWATLMLLGGAVGKSAQLPAGPTPVSALIHAATMVTAGVYLIARTHGL--FLMTPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDA---------------AIFHLMTHAFFKALLFLASGSVILAC-LCFLVGGAALSALPLVTAGFFSKDEILAGAMAHINLMVAGLVGAFMTSLYTFRMIFIVFH |
10 | 5t77A1 | 0.09 | 0.08 | 3.13 | 1.01 | Neff-PPAS | | FSRILGLFRDVLFAKYFGVFIAIMFPFFLRKVFGEGAMSSAFVPLYSEKSGEEKDKFLSSVINGFSLIILALVILSYFTKILAKKLLLITSPSIYFIFLWAISYSILNTNNK------------FFWPALTPSISNITIIIGTFLSTKYGIISPTIGFLIGSILMFFSIIKSIIKHKYYFTIKHFPHFLKLFFPTFMTMVVSQINTVVDM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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