>PF13163 (422 residues) DFKSLAPLSLSGEGPWYRLELPLAVQLHASQTDLRDIRVFNAAGEPQAYALARQQAQTTE QHTLSDVKWFPLYSSADAADSTPSVRVQSTTNGTLVEVQPSTQLEAGEEVLRGWLLDASA IKAPLQQLVLDWTSERDGFQRFSIEASDDLQHWQPWGEGQVARLSFADERVEQHEVALPG QTARYLRLLWNTPQTAPVLTSAQLQSSTTSSLPSPLVWSQPLKGSSAKAGEYTWQLPMGL NLERVRIALTQANSLAPATLYGRRESSLPWQPLGNGLLYRLTQNGQDVQQNELQLPGQTV QQLRLVVDERGGGLGAEAPSLEFAVRGTQLVFLARGAGPYTLALGNPTASAANLPLATLI PDYSAQRLKQLGQAKVEGAAQLASATVAPAAAVAAGGPDWKKIGLWAVLLLGVLALAGMA FS |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | DFKSLAPLSLSGEGPWYRLELPLAVQLHASQTDLRDIRVFNAAGEPQAYALARQQAQTTEQHTLSDVKWFPLYSSADAADSTPSVRVQSTTNGTLVEVQPSTQLEAGEEVLRGWLLDASAIKAPLQQLVLDWTSERDGFQRFSIEASDDLQHWQPWGEGQVARLSFADERVEQHEVALPGQTARYLRLLWNTPQTAPVLTSAQLQSSTTSSLPSPLVWSQPLKGSSAKAGEYTWQLPMGLNLERVRIALTQANSLAPATLYGRRESSLPWQPLGNGLLYRLTQNGQDVQQNELQLPGQTVQQLRLVVDERGGGLGAEAPSLEFAVRGTQLVFLARGAGPYTLALGNPTASAANLPLATLIPDYSAQRLKQLGQAKVEGAAQLASATVAPAAAVAAGGPDWKKIGLWAVLLLGVLALAGMAFS | |||||||||||||||||||
1 | 2qc5A | 0.10 | 0.07 | 2.47 | 1.23 | CNFpred | --FYLEEFNLSPDSGPYGITSSE-----------GKVWFTQHK-ANKISSLDQS----------GRIKEFEVPTP------AKVMCLIVSSLGDIWFTEN--------GANKIGKLSK-----KGGFTEYPLPQPDSGPYGITEGLN--GDIWFTQLNDRIGKLTA---DGTIYEYDLPNKGSYPAFITLGS----DNALWFTENQ-------NNSIGRITN-----TGKLEEYPLPTAAAPVGITSGN-----DGALWFVEIM----------GNKIGRITT---TGEISEYDIPTPNARPHAITAGK--------NSEIWFTEWGANQIGRITNDNTIQEYQLQ----TENAEPHGITFG--------------------------------------KDGSVWFALKCKIGKLNLN--- | |||||||||||||
2 | 3s6pA | 0.08 | 0.07 | 2.94 | 1.28 | Neff-PPAS | ---------DSDSIGWYFKYLDPAGATESARAVGEYSKIPDGLVIYNEECPVVTDVSVPLDGRQWSLSIFSFPMEMSLDVVNDLIEWLNNLADWRYVVDSEQWINFTNDTTYYVRIRVLRPTYDVPDPTEGLVRTVSDYRLTYKAITCEANMPTLVDQGFWIGGQYALTPTSLPQYDVSEAYALHTLTFARPSSAAALAFVWAGLPQGGTAPAGTPAWEQA-----SSGGYLTWRHNGTFPAGSVSYVLPEGF----ALERYDPNDGSWTDFASAGDTVTFRQVAVDEVVVTNNPAGGGSAPTFTVRVPPSNAYTNTVFRNTLLETRPSSRRLELPMPPADFGQTVANNPKIEQSLLKETLGCSKMRNPVFQLTPASSFGAVSFNNPGYERTRDLPDYTGIRDSFDQNMSTAVAHFRSLSHS | |||||||||||||
3 | 3cqoA | 0.11 | 0.07 | 2.47 | 1.12 | HHsearch | -----------------------------------------YNY--KNVALRGKATQS----ARYLHTHG---AAYN------------AIDGNRSDFEAGSCTHTVEQTNPWWRVDLLE-PYIVTSITITNRGCPERLNGVEIHIGNSLQENGVANPVGVISHIPA---GISHTISFERVEGRYVTVLLPGTNKVLTLCEVEVHGYRAPLAKGKATQSNAIDTKNTMDPWWRMDLSQTHRVFSVKVTNRDSKRINGAEIRIGDS-LDNNGNHNP-RCAVITSIP-AGASTEFQCNGMDGRYVNIVIPGREEYL--TLCEVEVYGSVLD--------------------------------------------------------------------------------------------- | |||||||||||||
4 | 2w5nA | 0.07 | 0.05 | 2.09 | 1.13 | PROSPECTOR2 | A-------MKPAGKTFSNVEI----FDPPTNYRDPQVLLELSDGTLLGTWENYSPEP-----------------------PNVWFPIVKSKDGGKEISKVKDTQNNWGLRYQPQLYELPRAFGKYPKCSGSSIPSDLSETLIEVYASRDKYTWEFVSHVALGLPNPGLTPVWEPFLMTYKEKL-ILYYSDQRDNATHSQKLVHQTTTDLKKWSKVVDDTKYAD-------------YYARPGMPTVAKLPNNEYIYVYEYGGGPNPPAGSDYWFPVYYRLSKDLNKAHHQIVSNDGTTPAGSPYVVWTPYGGK----NGTIVVSCGTRSEIFWDVPQPTMIMGAGILPPAGGKNT-----------------------------------------------------VSASVVRLSEVMKS | |||||||||||||
5 | 5y9hA | 0.13 | 0.11 | 3.88 | 0.93 | SPARKS-K | YFRAG---HVPDGMVLAQGWVTY-------HGSHSGFRVWSDEQKATPTVLLLSGQQDPRHHIQVRLEWQPD------TVSGRGAILRTAADNASFSVVVDGN---QEVPADTWTLD----------FKACALANSEQQKSVDIVFSQDL----TVSLIPVLKAGKNAPSAKIAKLVVNSTTLKEFGVRGISNNVDSTGTAWRVAGKNTGKEIGVGLSSDSLRRSDSGVNWMTFNSN-----DTLDIVLTGPADTYPITLDVVGDNQGSFLPNSKSVDIVFSS----PQDLTVSLNAPSAKIAKLVVNST------TLKEFGVRGISTGTAWRVAGKNTIGVGLSSDSLRRSDSTEKWNGVNWMTFNSNDTLDIVLTGPAQNVTADTYPITLDVVGYQGSFLPNSEQQKSVDIVFSS----- | |||||||||||||
6 | 2qqmA | 0.12 | 0.09 | 3.12 | 0.89 | FFAS-3D | ----SGVIKSPGPEKYYIVFAPKMIILEFESFDLEDLEIWDGFGQKTPGRIRSSSTDSAIAKEGFSANYSVLQSSVSFKCMEALGMESGEIHSDQITASSQYSTPGEDSYREWIQVDLGLL-RFVTAVGTQGAISKEYVKTYKIDVSSNGEDWITIKEPVLFQGNTNPTDVVVAVFP-KPLITRFVRIKPATWETGISMRFEVITSSNQGDVTSRSGWALPPAPHSYINEWLQIDLGEEKIVRGIIIQGENKVFMRKFKIGYSNN-GSDWKMIMDDSKRKFEGNNNYDTPELRTFPALSTRFIRIYPERATHG----GLGLRME------------------LLG----------------------------------------------------------------------------- | |||||||||||||
7 | 5k9hA | 0.13 | 0.09 | 3.18 | 0.60 | HHpred | ------------------------------WNDGGDLRVGTEAGNVGETNWSLLNHDGEHYGLENGDSWVPTYYKSVGRNSTLLLNFPIAPNGRIHPNDSKNLAEKAQTKGDETVIDFGK-PTTFNRFLAEEDRYGQRVKKFLLEAEIN-GQWQQLKDALVE-NGDGLTTIGHRRIIFPTVNATKLRFTVVNTKCEPFIKKLGVYLAPELTAIPDAGEKKSSNLHFSSPTQMMIDWETEQTITSFRYLPPQESTVTHYTLWASTD-WSNWTKLASGEFSNVVNNPIWQT---IKFQPVRAKILKLDADRLATGNRMAYG--DVEVNLK---------------------------------------------------------------------------------------------- | |||||||||||||
8 | 5n8oA | 0.12 | 0.11 | 4.03 | 0.92 | MUSTER | DRPSLAIVSGQGGAAGQR-ERVAELVMMAREQGRE-VQIIAADRRSQMNLKQDERLSGELITGRRQ------LLEGMAFTPGSTVIVDQGEKLSLKETLTLLD-GAARHNVQVLITDSGQRTGTGSALMAMKDAGVN-----TYRWQGGEQRPATIISEP--DRNVRYARLAGDFAASVKAGEE-SVAQVSGVREQAILTQAIRSELKTQGVLGHPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAGETQVVRLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAPASLPVSDSPFTALKLEFASVTQMAMNATLNGLARSDVRLYSSLDETRTAEKLARHPSFTVVSEQIKARALETAISLQKAGLHT | |||||||||||||
9 | 3hfqA | 0.11 | 0.08 | 2.80 | 1.23 | CNFpred | ----------------------------------MQERILFGTSQGIYQGTLDT------AKTLTNDGLLAATQ--------NPTYLALSAKDCLYSVDKE------DDEGGIAAWQIDGQ--TAHKLNTVVAP---GTPPAYVAVDEARQLVYSAGTAEVMKIAADGALTLTDTVQHSGHGSHIHYTDLTPD---NRLAVIDLGSD------KVYVYNVSD----QLSEQSVLTMEAGFGPRHLVFSP----DGQYAFLAGEL--------SSQIASLKYDTTGAFTQLGIVKTIP-HNGAAAIRLSH-------DGHFLYVSNRNTLAVFAVTADGHLTLIQQI-STEGDFPRDFDLDPTE--------------------------------------AFVVVVNQNTDNATLYARDLT | |||||||||||||
10 | 3cqoA | 0.11 | 0.07 | 2.40 | 0.91 | HHsearch-2 | -----------------------------------------YNYK--NVALRGKATQS----AR-----YLHTH------GAAYN----AIDGNRNSFEAGSCTHTVEQTNPWWRVDLLE-PYIVTSITITNRGCPERLNGVEIHIGNSLQENGVANPVGVISHIPA---GISHTISFERVEGRYVTVLLPGTNKVLTLCEVEVHGYRAPLAKGKATQIAIDGTKNTMDPWWRMDLSQTHRVFSVKVTNRDSKRINGAEIRIGDS-LDNNGNHNP-RCAVITSIP-AGASTEFQCNGMDGRYVNIVIPGREEYL--TLCEVEVYGSVLD--------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |