Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | NDEYELIRTSGNAFEIFPSQDAVYATQYIPAKITDIAWDDKYIIAKQTEEKSDPNNPDAAIANKKSEHYWIIDVKHNKRFGPYNEKQFNEQKDAFKIKVPFQNVD |
1 | 4lqzA | 0.12 | 0.11 | 4.06 | 1.07 | SPARKS-K | | GQRFEIQQHNETIGSIYFSADYGIEKGTAKYFIDKVGS-KRYLFIEYIPDNVLNCKPDKYKKDKVTYYVYLIENLDDEVFHPIIADDVATKSPHQND-RTLKLN- |
2 | 2lvmA | 0.12 | 0.10 | 3.36 | 0.45 | FFAS-3D | | AGKYKLLFDDGYECDVLGKDILLCDPIPLDTEVTALSEDEYFVVKGHR--------------KESGELYYSIEKEGQRKWYKLSLEQGNRLREQYGL-------- |
3 | 5gvbA | 0.08 | 0.06 | 2.28 | 0.27 | HHpred | | GQGWAAAATSALLLRLFTIGGVQKEVFSLAGPVVSAGHGEQLFIVYHRGTGF---------DGDQCLGVQLLELGKKQIGDPLTRK------------------- |
4 | 5ftxA6 | 0.07 | 0.07 | 2.75 | 0.82 | MUSTER | | VANYQIKVLDDGKIDKSATESPANNDVQL--KVYAVDANGNIVGDITNDVTITSEATDTNGVTANGDTVYVITDNGSKKVG---KETLTVKLGTVTLGTDVEVID |
5 | 5x7yA | 0.12 | 0.10 | 3.37 | 0.97 | CNFpred | | KISLICNKTEDGEYDVVHD-------GYNLFRIIETAYEDYIIFHLNNVNQ------------QEFQLMELYGRKP--DVSPKVKEKFVRYCQGMEIPKNILDLT |
6 | 5v8wA | 0.10 | 0.03 | 1.06 | 0.36 | HHsearch-2 | | ---------------------------------------------------------------------------KPLLSGSIPVEQFVQTLEKHGFSDIVEDTA |
7 | 4aq1A5 | 0.12 | 0.11 | 4.00 | 0.79 | Neff-PPAS | | --VLQDIKVDATSVKLSDEAVGGGEVEGVNQKTIKVSAVDEGLVIKNV---NSDNTIDFDSGNSATDQFVVVATKDKIVNGKVEVKYF----KNASDTTPTSTKT |
8 | 4e4wB2 | 0.11 | 0.08 | 2.78 | 0.54 | HHsearch | | -------KDELGEKYLTL----TVSKNDFKKMEVVGQFNLGFIIVTRKVD--------------NKYDLFIVDQMIGK---PLNKKTMTRVVHNLSELDKWNLM- |
9 | 2xstA | 0.08 | 0.07 | 2.66 | 0.81 | SP3 | | EGGLHVHMEFPNQVDAEYLKVGSEGHFRVPLDVRIVDTDSSFAVLYIYKELE----------GALSTMVQLYSRTQD-----VSLKSFQDFYPTLGLPKDMVMLP |
10 | 4aq1A5 | 0.09 | 0.09 | 3.25 | 0.49 | PROSPECTOR2 | | --VLQDIKVDATSVKLSDEAVGGGEVEGVNQKTIKVSATKGKVTVTTIKNVNSDNTIDFDSGNSATDQFVVVATKDKIVNGKVEVKYFKN-----ASDTTPTSTK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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