Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | DKELMEKSEKLVKEGDIYWLKAFKDLEGDIKIGDGTVSMKDLKELDKKAGINTDNVMKNVKDGTELIGNWGFQGTDGFNMSLILKGDKTFETYGKGEYP |
1 | 5ts4A | 0.16 | 0.15 | 5.06 | 0.97 | SPARKS-K | | MSEEAKIAIELFKEAMKD-PERFKEMCSPIESNGQEYGSEECKKFAEEMKKTEVRVERYRSDGDRFEIELRVNKT--FRMEIRMRKNGEFRIEEMRLHG |
2 | 3h3hB | 0.04 | 0.04 | 2.02 | 0.51 | FFAS-3D | | EPITQAFAQQFSREWIDAWNAHLDAILSSGRLRGKEQVGAYWREALRIPDLHFE-WIATLAGVDSVAIHYRGAKGRLALEVFHFGPDRRVVKA------ |
3 | 2m4lA | 0.23 | 0.09 | 2.85 | 0.39 | HHpred | | ----------------------------------------------------------WTLNSNNIIGYWSTGIE-GTHKLLSFDEDGSFGIYSNAT-P |
4 | 5j6qA1 | 0.20 | 0.17 | 5.51 | 0.87 | MUSTER | | DKNYAKDSAKLIEEVRKALEVKFE----DTKAGANVNDRVYDIKVDNVNLTNATQLQNKINSLTE---------GQSLKVTIQDKGGGKVVDYDIDSKE |
5 | 1ldpH | 0.12 | 0.08 | 2.87 | 0.52 | CNFpred | | GPEYWERITQIAKGQEQWFRVNLRTLLGYY--------NQSAGGT------------------HTLQWMYGCDVLLRGYEQFAYDG-CDYIALNE---- |
6 | 2m4lA | 0.18 | 0.08 | 2.63 | 0.72 | HHsearch-2 | | ---------------------------------------------------GEDWTE---LNSNNIIGYWSTGIE-GTHKLLSFDEDGTGSFGIYSFQM |
7 | 5ts4A | 0.14 | 0.13 | 4.51 | 0.98 | Neff-PPAS | | -SEEAKIAIELFKEAMKDPERFKEMCSPDTRIESNYRGSEECKKFAEEMKKTEVRVERYRSDGDRFEIELRVNKTFRMEIRMRKVEFRIEEMRLHG--- |
8 | 2m4lA | 0.17 | 0.07 | 2.33 | 0.83 | HHsearch | | ---------------------------------------------------GE----DWTLNSNNIIGYWSTGIE-GTHKLLSFDEDGTGSFGIYSFQ- |
9 | 5xnwA1 | 0.17 | 0.14 | 4.66 | 0.74 | SP3 | | DTAEIRKLNLAVAKGMD---------GGAYTQTDLRISRQRLAELVRNFGL------VADGVGPVRLLTAQGPSGKRYEFEARQEPDGLYRISRLGR-S |
10 | 5ts4A | 0.12 | 0.12 | 4.26 | 0.51 | PROSPECTOR2 | | MSEEAKIAIELFKEAMKDPERFKEMCSPDTSNGQEYRGSEECKKFAEEMKKTEVRVERYRSDGDRFEIELRVNKTFRMEIRMRKV-NGEFRIEEMRLHG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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