Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MWKEKGKQLLAWITLGIVILLQISFHIIEWLFHKVVSILTFLPNMTLEMISIVRSIIASIAIVIIWSIAKLWNKLFKKDS |
1 | 2x1gF2 | 0.16 | 0.16 | 5.39 | 0.83 | SPARKS-K | | FFKPLMQQLLREFIQHSFKLFNFSNITMETFFGCLTQIIKKIPQVLEDYDRLVFYAQRGMAIRNSIQFLTHFVMQSRNHA |
2 | 4b4aA1 | 0.14 | 0.12 | 4.28 | 0.72 | FFAS-3D | | ---RELRYRLIISIIAFLIGSGIAFYFAKYVFEILKEPILKSYPEVPLFILIKISLAVGFIIASPVILYQFWRFI----- |
3 | 2c0wA | 0.25 | 0.14 | 4.26 | 0.21 | HHpred | | ----------------------------------AKAAFDSLQASATEMIGYAWAMVVVIVGATI--GIKLFKKFTSKAS |
4 | 3p5nA | 0.14 | 0.14 | 4.66 | 0.69 | MUSTER | | IYKNKRSTKSLITGLIIATIVMTIVLSILNYF--VLLPLYGMKVIIVSGIIPFNIIKGIVISIVFILLYRRLANFLKR-- |
5 | 5gpjA | 0.09 | 0.09 | 3.36 | 0.61 | CNFpred | | ARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADV |
6 | 2kogA | 0.25 | 0.10 | 3.10 | 0.40 | HHsearch-2 | | AAKLKRKYWWMMIILGVICAIILII-IIVYFST----------------------------------------------- |
7 | 5xj5A2 | 0.10 | 0.10 | 3.66 | 0.74 | Neff-PPAS | | ---SPSVALFSFLVWLGIFLWKRYVSLASITATISAFLFLFVAGYPVNVLFMAIVIGALIIYRHRENINRLLTGREHRFG |
8 | 5wyjMC | 0.25 | 0.06 | 1.94 | 0.33 | HHsearch | | ----------------------------------------ELQK-------------------AHSEISELYANLVYKL- |
9 | 2wieA | 0.10 | 0.10 | 3.70 | 0.69 | SP3 | | ESNLTTAASVIAAALAVGIGSIGPGLGQGQAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALVLLFANPF |
10 | 5cwmA1 | 0.16 | 0.16 | 5.39 | 0.58 | PROSPECTOR2 | | DPEDELKRVEKLVKEAEELLLEKALRTAEEAAREAKKVLEQAEKRAVELVVRVAELLLRIAAEEAARLAKRVLELAEKQG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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