Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MKYIEIGFGNRWFVRTETENKDGTEFEERGIIKPIYLESLYVRMWFRKTCLILDTKEGFKKVKKRRIEYKFIFGIVS |
1 | 3u4yA2 | 0.18 | 0.18 | 5.91 | 0.83 | SPARKS-K | | NGLILIDRSSANTVRRFKIDADGVQEFISGGTRPPDGNFAFVANLIGNSIGILETQNPLNAVGTNNLSTVDVFNFNQ |
2 | 5ifeA2 | 0.21 | 0.21 | 6.61 | 0.42 | FFAS-3D | | FLYLNIGLQNGVLLRTVLDPVTGDLSDTRTGSRPVKLFRVAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFAS |
3 | 3u44B7 | 0.25 | 0.18 | 5.64 | 0.24 | HHpred | | PIGLELGFGGKGLPPLTFQLKNGCTMELVGRID---------RVDKAKGLRIVAYKSSDKGLDLA------------ |
4 | 3s8vA1 | 0.15 | 0.14 | 4.79 | 0.84 | MUSTER | | ANGLTIDYAKRRLYWTDLDTNLGLEVIADDLPHPLTQYYIYWTDWSRRSIERANKTSGRTIIQGHLDY---VMDI-- |
5 | 3ei4A | 0.12 | 0.12 | 4.14 | 0.80 | CNFpred | | SHYLLCALGDGALFYFGLNIETGLLSDRKKVT-PTVLRTFNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS |
6 | 3u12A | 0.12 | 0.06 | 2.29 | 0.45 | HHsearch-2 | | ---------------------------------SLKIH-GPIRIRS-QTGI-TKWKEGSFEIVEKENKVSLVVHYNT |
7 | 1qa7B1 | 0.08 | 0.08 | 3.08 | 0.85 | Neff-PPAS | | --LVQFGVGEKWVMNALGVKDDWLLVPSHAYKFEKDYEMMEFYFNRGGTYYSISAGNVVIQSLDVGAQDVVLMKVPT |
8 | 5lqwX1 | 0.11 | 0.05 | 1.86 | 0.36 | HHsearch | | DLNLHVGLENGVYMKFHIGDVDGSFTDIKR-LGLKP----------------------------------------- |
9 | 3njaA2 | 0.17 | 0.09 | 3.00 | 1.00 | SP3 | | --------DRPFDVEYRIVRPDGQ------------------VRELLERNHIQRQASG---------QVDHLWGTVI |
10 | 2g3mA2 | 0.17 | 0.17 | 5.56 | 0.44 | PROSPECTOR2 | | EGSIIPLEGDELIVETSFKRYDNAEITSSSFSREIYVSKLTITSEKPVSKIIVDDSKEIQVEKTMQNTYVAKINQKE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|