Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | NVQLGEHIIFNGIESLVSASILGGYIYFLFNPEENAQKTMLLTMIGIVGGCISYSMTNYALPLQLSSAFFHGLWTWFIAFCLADVFNLLQDPEGIESN |
1 | 2x1gF2 | 0.12 | 0.12 | 4.31 | 0.68 | SPARKS-K | | SKTAIVMFFKPLMQQLLREFIQHSFKLFESTPEQNFSNITMETFFGCLTQIIKIPQVLEDKTLAYDRLVFYAQRGMNSIQFLTHFVMQSRNHAHVTEV |
2 | 3o0rB2 | 0.17 | 0.15 | 5.03 | 0.59 | FFAS-3D | | ------HLWVEGVWELIMGAILAFLVKITGVDREVIEKWLYVIIAGIIGTGHHYFWIGVPGYWLWLGSVFSALEPLPFFAMVLFAFNTINRRRR---- |
3 | 3bicA1 | 0.19 | 0.13 | 4.27 | 0.41 | HHpred | | ---------------------TSGWSLTEQDPYNNIVRTAIEAMAAVFGGTQSLHTNSFDEALGLPTVKSARIAR--------NTQIIIQEESGIP-- |
4 | 4h33A | 0.13 | 0.12 | 4.22 | 1.05 | MUSTER | | SNGL---NRF--LMIFVLLVIIIPVPMVFIEPEINNYPDALWWAIVTATTVGYGDIVPVTPIGRILASIMMLFGIAFIGMITSTITNFFRCKKPT--- |
5 | 3rkoB | 0.09 | 0.07 | 2.74 | 0.68 | CNFpred | | --------------VGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQA----WDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKM |
6 | 4xc6A2 | 0.17 | 0.15 | 5.02 | 0.40 | HHsearch-2 | | FFSNGMDP---EYSVLRVAVTMSGRSLHAQEIDFNDIRTTLQALIAIYDNCNSLHTNAYDEAITTPTAESVRR-----A---LAIQLIINREWGVAKC |
7 | 4h33A | 0.11 | 0.10 | 3.67 | 0.82 | Neff-PPAS | | -----SNGLNRFLMIFVLLVIIIPVPMVFIEPEINNYPDALWWAIVTATTVGYGDIVPVTPIGRILASIMMLFGIAFIGMITSTITNFFRCKKPT--- |
8 | 3bicA1 | 0.17 | 0.15 | 5.04 | 0.72 | HHsearch | | FWGIGMNFYMRAGRHLIEMFQTSGWSLTEQDPYNNIVRTAIEAMAAVFGGTQSLHTNSFDEALGLPTVKSARIAR--------NTQIIIQEESGIPK- |
9 | 4h33A | 0.11 | 0.10 | 3.68 | 0.69 | SP3 | | ----RSNGLNRFLMIFVLLVIIIPVPMVFIEPEINNYPDALWWAIVTATTVGYGDIVPVTPIGRILASIMMLFGIAFIGMITSTITNFFRCKKPT--- |
10 | 2wuiA2 | 0.10 | 0.09 | 3.43 | 0.44 | PROSPECTOR2 | | DENARV-----PALDILLRAGMGFLRQCCEPGSELLEKQGQRFGLRQIRRAVERGELPARLDVELASIYLQSLWDGICGTLFRAGLDSLRSSPYLLLA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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