Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | EMQEKWTPDQVVEASAPIIEHQPEIELKLKLDHIDVKAMLSDFGECLHIAKVNGKYVIVIEGDSFTFEKGVSPVEFLKPDDLEEVLKRV |
1 | 2lndA | 0.18 | 0.17 | 5.47 | 0.77 | SPARKS-K | | LLVISTDTNIISSVQERAKHNYPGRYIRTATSSQDIRDIIKSMKDN------GKPLVVFVNGASQNEKEGVS-YDVLKSTDPEELTQRV |
2 | 1vmkB1 | 0.20 | 0.17 | 5.38 | 0.53 | FFAS-3D | | -------MKKIEEARTFISERTNSPDILIILGS----GPFIEFPGKLVFGRISDKPVMIMAGRFHLYE-GHDPATVAFPVYLAKYV--- |
3 | 3khsB1 | 0.21 | 0.18 | 5.73 | 0.27 | HHpred | | -----TDYDLAKETAAWLNKQLPVLGIVCGLDSLE-TSITVAYSDSLIFGSVNGVSCVCMKGR-FHLYEGHTAARATFP--MR-VFKA- |
4 | 4yptA1 | 0.16 | 0.13 | 4.49 | 0.66 | MUSTER | | ---IQLDDDARVFVQANMDCLPTDWRLVNKF--DSVDGV-----RTIKYFECPGGIFVSSQGKKFGYVQNGSFKEA-SVSQIRALLA-- |
5 | 4w4jA | 0.14 | 0.11 | 3.82 | 0.69 | CNFpred | | -------DPRVAQWITTVCRATQWLDLRFVSGPGDLL--------RGMVARRSEETVVALRNQLVTFTA----MDIGHQHALVPVLTAG |
6 | 2b1rA1 | 0.20 | 0.15 | 4.66 | 0.28 | HHsearch-2 | | YLSEHWQRDILQAIADGFEAPQSPWKISYHLDPQQLTEMLKETGIPVQVIFSSGKDVDLLPQRS------------------------- |
7 | 5v1qA4 | 0.11 | 0.10 | 3.62 | 0.67 | Neff-PPAS | | ----GVRPDRQIKLAKYFNEVGKKCRINAVY----TKQSYEQIIELVDFCINKIDRFSVANY--SEVTGYTKIKKKYDLADLRRLNEYV |
8 | 5ghaE | 0.16 | 0.10 | 3.35 | 0.27 | HHsearch | | ----------------RVVLRLPE-RKEVEVGNRPLREVLEELGLETVVAVRGEELLEVREEDTLEVLSAIS----------------- |
9 | 4xttA | 0.18 | 0.16 | 5.11 | 0.60 | SP3 | | ----------ASASVLDYLELADEHELKAKMAGQSIIDIRAQYGINIIAIKRGKEFIISPNPNI-NLEIGDI-LIMIHDNDLNRFEKNI |
10 | 5t5sA2 | 0.16 | 0.15 | 4.88 | 0.40 | PROSPECTOR2 | | V------QKRVLEKTKQFIDSNPNQPVILEMESGATAKALNEALKLFTVDNEAGKITCLCQVPQNAANRGLKASEWVNVGCLQEALQLA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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