Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | NVLVTSFAGLDLPPTLVLPLPSSTTVTELRDRIDERLPTTQSRLILTTLSNKQLPSASESPISEYLSTSEDEFLSLRLAVPLCGGKGGFGSQLRAAGGRMSSRKKKNQEDHGSSRNLDGRRLRTVNEAKALAEYLAIKPEMEKKEKEKRRERWEQIVQLSE |
1 | 2kdiA | 0.24 | 0.14 | 4.46 | 1.07 | SPARKS-K | | QIFAKTLTGK----TITLEVESSDTIDNVKSKIQDKIPPDQQRLIWA---GKQLED--GRTLSDYNI---QRESTLHLVLRLRGGSMEEELIRKAIELSLKESRNSGGY---------------------------------------------------- |
2 | 2kdiA | 0.17 | 0.11 | 3.66 | 0.93 | FFAS-3D | | QIFAKTLTG----KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIW-AGKQLEDGRT-----LSDYNIQRESTLHLVLRLRGGSMG----------------------------------GAADEEELIRKAIELSLKESRNSGG-------------- |
3 | 3q3fA | 0.28 | 0.14 | 4.36 | 1.43 | HHpred | | QIFVKTLTGK----TITLEVEPSDTIENVKAKIQDGIPPDQQRLIF---AGKQLEDG--RTLSDYNI---QKESTLHLVLRLRGGGQTFTKIR-------------------------------------------------------------------- |
4 | 3tixA | 0.12 | 0.11 | 3.75 | 1.21 | MUSTER | | NLKVSD-GSS----EIFFKIKKTTPLRRLMEAFAKRKEMDSLTFLY----GIEIQADQ--TPEDLDMEDND---IIEAHREQIGG--LPSLPFLACISDF-PENHGTSRRSATVSLERVHELFTEHWLSNLKNRREKRQELAEEAVYCRSEMLSQRKLLAA |
5 | 3l0wB | 0.29 | 0.12 | 3.79 | 1.03 | CNFpred | | QIFVKTLT----GKTITLEVESSDTIDNVKSKIQDGIPPDQQRLIFA---GKQLED--GRTLSDYNIQ---KESTLHLVLRL------------------------------------------------------------------------------- |
6 | 3q3fA | 0.28 | 0.14 | 4.36 | 0.93 | HHsearch-2 | | QIFVKTLTGK----TITLEVEPSDTIENVKAKIQDGIPPDQQRLIF---AGKQLEDG--RTLSDYNI---QKESTLHLVLRLRGGGQTFTKIR-------------------------------------------------------------------- |
7 | 2kdiA | 0.20 | 0.12 | 3.97 | 0.91 | Neff-PPAS | | QIFAKTLTG----KTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIW-AGKQLE--DGRTLSDYNIQRES---TLHLVLRLRGGSDEEELIRKAIELSLKESRNSGGY---------------------------------------------------- |
8 | 3q3fA | 0.28 | 0.14 | 4.36 | 1.46 | HHsearch | | QIFVKTLTGK----TITLEVEPSDTIENVKAKIQDGIPPDQQRLIF---AGKQLEDG--RTLSDYNI---QKESTLHLVLRLRGGGQTFTKIR-------------------------------------------------------------------- |
9 | 3tixA | 0.07 | 0.06 | 2.51 | 0.82 | PROSPECTOR2 | | ELKVSD-----GSSEIFFKIKKTTPLRRLMEAFAKGKEMDSLTFLY---DGIEIQAD--QTPEDLDM---EDNDIIEAHREQIGGLPSLPFLAC--------------ISDFPENHGTSRRSATVSLERVHELFTRQELAEEAVYCRSEMLSQRKLLAAVD |
10 | 2kdiA | 0.29 | 0.14 | 4.35 | 0.85 | SAM | | QIFAKTLTGK----TITLEVESSDTIDNVKSKIQDGIPPDQQRLIW---AGKQLEDG--RTLSDYNI---QRESTLHLVLRLRGGSMGGAA---------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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