>PF12997 (283 residues) MRAIGFSELKDRKELQNLITDIIVNADERTYTSKDDDTILAEFCKDFAENIGIAVCGEFD SEDKFSFDYYYPYLRGSEISSEEDVSVERHAGTESYAGICDDIKVGVSLIFYLQNMIPYV KAHNSKKLPVIGTTVTLSALSLQGKIMMPIIKNEKDKKKIKKVSNNRNSLIAAARKGDEE AIESLTLEDMDTYTVISKKIQKEDVFTLVDTYFMPYGVECDHYSILGEILDCNKVTNKIT SEVIYQMTVNCNDLVFSICINEKDLYGEPQVGRRFKGSIWMQG |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | MRAIGFSELKDRKELQNLITDIIVNADERTYTSKDDDTILAEFCKDFAENIGIAVCGEFDSEDKFSFDYYYPYLRGSEISSEEDVSVERHAGTESYAGICDDIKVGVSLIFYLQNMIPYVKAHNSKKLPVIGTTVTLSALSLQGKIMMPIIKNEKDKKKIKKVSNNRNSLIAAARKGDEEAIESLTLEDMDTYTVISKKIQKEDVFTLVDTYFMPYGVECDHYSILGEILDCNKVTNKITSEVIYQMTVNCNDLVFSICINEKDLYGEPQVGRRFKGSIWMQG | |||||||||||||||||||
1 | 4r04A | 0.14 | 0.12 | 3.98 | 0.81 | SPARKS-K | IIEINLVAKSDKNYLISNLSNTIEKIKNIAYNYTDESNNKYFGAISKTSQ---KSIIHYKKDSKNILEFYNDLEFNSKDFIAEDINVFMKDDINTITGKYYNTDKSIDFSISLV----------------SKNQVKVNGLYLN--------------------ESVYSSYLDFVKNSDNLFLDNIS---------FWKLFGFENINFVIDKYFTLVGKTNLYVEFICNIDYFGEWKTSSSKSTIFNVVVEPIYLDFSVLIAPDLYTSLTNYYSYYPEIIVLNP | |||||||||||||
2 | 3e8wA | 0.07 | 0.05 | 2.02 | 0.54 | FFAS-3D | VLPVEKCNLEDSACMTSAFQQALPTFDDFAFDLSGLQFTLKEGKLKGLKGAVIDNVKWDLKKKNIEVDFHLDATVKGHYTAGGRILILPITGDGQMKLKLKNIHIHLVVSYEMEK------------DAEGVDHVIFKKYDVKDNAQFGLTNLFNGNKELSDTNQNWKQVSEEFG---KPVMEAAAKKIFKNIKHFLAKVPIAEIANV--------------------------------------------------------------------------- | |||||||||||||
3 | 3anwB | 0.17 | 0.06 | 1.98 | 0.29 | HHpred | ---------------------------------------------------------------------------------------------------FGDWKSGDIVVVEIVDEIGEIDKVIAE----ERESEPLTLLPEGAEFYAYYLENYTKLRKLRLKLIRFNKILKAVMLNSLELLSRLAPEERRIYLQMSKIRNEGD------------------------------------------------------------------------------- | |||||||||||||
4 | 3u1wA | 0.13 | 0.10 | 3.53 | 0.61 | MUSTER | ------QGIIPLPPVENAFQEKYPDAK-NPVFEIEGNYYVVDFNNG-----GSETTAWFTDQGIWEKIDILPAFKQSFYSTVDDTYAINRLNGIVYKIEAEQSNSEVDLYYS------------------------------YGNLIKAVDDEINNDAPI-VIPKEVSNLEITFANAE---LLDIQQNS-LGYEDIDNQIYKVAQLNWQSTTWVPQIVQ-SAYA--DKVQSIYTLLNA--NGTFYLFKVSHNGQDKTITFDVF---GNIV------------- | |||||||||||||
5 | 3ndaA | 0.12 | 0.09 | 3.26 | 0.75 | CNFpred | LHKVDFAG-EPQAAVDFVNNWVKRKT-KLFNEPLDPDTLLVLLNA-------IYFKGEWNT-EHTEKRQFFNGG-VDTMRLEARIKYRFFD-DLQVEVVELPYGLDYTMAILLPGVEGLKQNLTI--LRERKITVLLPKFKLETKYSLK-------------------APLQSL--GIKQIFESG-----ADLSGINDG--SLRVSAVEHKAVVEVNEEGTVAAATTGVVIVP-VVFRVDHPFLFFIRNTRTDDIFFVGQVNKL------------------- | |||||||||||||
6 | 3bu2A2 | 0.10 | 0.02 | 0.92 | 0.36 | HHsearch-2 | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLFYNKEAVGDVAFLQ---KFVVGYVETKDKHPDA---DKLSVLSVDVATEKLQIVCGAPNV----EAGQKVVVAKELRG | |||||||||||||
7 | 3rgaA | 0.07 | 0.06 | 2.45 | 0.74 | Neff-PPAS | --------MPAETVRKEVALEYCRRVNAG------ELEGVLQL---------------------FAPDARLVDPLGTEPVVGRAALAARLAPGAVHEEPGRPYAAHDGTSVVLPATVTVGAPGAPPQRRGRTRVMGVIEVGEDGLIREDSSWTARPAPDEERRKELAREHCLRINDGDVDGLLKLTRTGLEALRAHATMAVGSNVRETAGLTVAGQDGRHAAVTVSATMDYLPSGPLLARHGIEYVMVIGVDADEMRAYWGATDVSLLDP------------- | |||||||||||||
8 | 3anwB2 | 0.13 | 0.05 | 1.59 | 0.38 | HHsearch | ---------------------------------------------------------------------------DETDKIIKVIAEERESE--PL--------TLLPEGL-YERAEFYAYYLENYVRLNP-----------------N-VK-LTKLANLRDKLIRFNKILKAVMLNSLELLSRLAPEERRIYLQMSKIRNEGDA------------------------------------------------------------------------------ | |||||||||||||
9 | 3u1wA | 0.11 | 0.09 | 3.19 | 0.64 | SP3 | ------QGIIPLPPVENAFQEKYPDAKN-PVFEIEGNYYVVDFNNG-----GSETTAWFTDQGIWEKIDISPAFKQSFYSTVDDTYAINRLNGIVYKIEAEQSNSEVDLYYSQYGNLIKAVDDEINNDAPIVIPKEVSNLEFANAELLDIQQNSLGYELDIDNQIYKVAQLNK--DY------RWQSTTWASEQEVPQIVQG----FESSAY--ASD----------KVQSIYTLLNA--NGTFYLFKVSHNGQDKTITFDVF---GNIV------------- | |||||||||||||
10 | 3rgaA | 0.05 | 0.04 | 1.94 | 0.84 | PROSPECTOR2 | -------HMPAETVRKEVALEYCRRVNAGARLVDPLGTEPVVLAPALRGAVHEEPGRPYAHDGTSVVLPATVTVGAPGAPPQRRGRTR-------VMGVIEVGEDGIREMRVMWGVTD---------------------------SSWTARPAPDEERRKELAR----EHCLRINDGDVDGLLKLTRTGLEALRAHATMAVGSNVRETAGLTVAGQDGRHAAVTVSATMDYLPSGPADPHRALIYVMVIGVDADEMRAYWGATDV-------------SLLDP | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |