Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | MRAIGFSELKDRKELQNLITDIIVNADERTYTSKDDDTILAEFCKDFAENIGIAVCGEFDSEDKFSFDYYYPYLRGSEISSEEDVSVERHAGTESYAGICDDIKVGVSLIFYLQNMIPYVKAHNSKKLPVIGTTVTLSALSLQGKIMMPIIKNEKDKKKIKKVSNNRNSLIAAARKGDEEAIESLTLEDMDTYTVISKKIQKEDVFTLVDTYFMPYGVECDHYSILGEILDCNKVTNKITSEVIYQMTVNCNDLVFSICINEKDLYGEPQVGRRFKGSIWMQG |
1 | 4r04A | 0.14 | 0.12 | 3.98 | 0.81 | SPARKS-K | | IIEINLVAKSDKNYLISNLSNTIEKIKNIAYNYTDESNNKYFGAISKTSQ---KSIIHYKKDSKNILEFYNDLEFNSKDFIAEDINVFMKDDINTITGKYYNTDKSIDFSISLV----------------SKNQVKVNGLYLN--------------------ESVYSSYLDFVKNSDNLFLDNIS---------FWKLFGFENINFVIDKYFTLVGKTNLYVEFICNIDYFGEWKTSSSKSTIFNVVVEPIYLDFSVLIAPDLYTSLTNYYSYYPEIIVLNP |
2 | 3e8wA | 0.07 | 0.05 | 2.02 | 0.54 | FFAS-3D | | VLPVEKCNLEDSACMTSAFQQALPTFDDFAFDLSGLQFTLKEGKLKGLKGAVIDNVKWDLKKKNIEVDFHLDATVKGHYTAGGRILILPITGDGQMKLKLKNIHIHLVVSYEMEK------------DAEGVDHVIFKKYDVKDNAQFGLTNLFNGNKELSDTNQNWKQVSEEFG---KPVMEAAAKKIFKNIKHFLAKVPIAEIANV--------------------------------------------------------------------------- |
3 | 3anwB | 0.17 | 0.06 | 1.98 | 0.29 | HHpred | | ---------------------------------------------------------------------------------------------------FGDWKSGDIVVVEIVDEIGEIDKVIAE----ERESEPLTLLPEGAEFYAYYLENYTKLRKLRLKLIRFNKILKAVMLNSLELLSRLAPEERRIYLQMSKIRNEGD------------------------------------------------------------------------------- |
4 | 3u1wA | 0.13 | 0.10 | 3.53 | 0.61 | MUSTER | | ------QGIIPLPPVENAFQEKYPDAK-NPVFEIEGNYYVVDFNNG-----GSETTAWFTDQGIWEKIDILPAFKQSFYSTVDDTYAINRLNGIVYKIEAEQSNSEVDLYYS------------------------------YGNLIKAVDDEINNDAPI-VIPKEVSNLEITFANAE---LLDIQQNS-LGYEDIDNQIYKVAQLNWQSTTWVPQIVQ-SAYA--DKVQSIYTLLNA--NGTFYLFKVSHNGQDKTITFDVF---GNIV------------- |
5 | 3ndaA | 0.12 | 0.09 | 3.26 | 0.75 | CNFpred | | LHKVDFAG-EPQAAVDFVNNWVKRKT-KLFNEPLDPDTLLVLLNA-------IYFKGEWNT-EHTEKRQFFNGG-VDTMRLEARIKYRFFD-DLQVEVVELPYGLDYTMAILLPGVEGLKQNLTI--LRERKITVLLPKFKLETKYSLK-------------------APLQSL--GIKQIFESG-----ADLSGINDG--SLRVSAVEHKAVVEVNEEGTVAAATTGVVIVP-VVFRVDHPFLFFIRNTRTDDIFFVGQVNKL------------------- |
6 | 3bu2A2 | 0.10 | 0.02 | 0.92 | 0.36 | HHsearch-2 | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLFYNKEAVGDVAFLQ---KFVVGYVETKDKHPDA---DKLSVLSVDVATEKLQIVCGAPNV----EAGQKVVVAKELRG |
7 | 3rgaA | 0.07 | 0.06 | 2.45 | 0.74 | Neff-PPAS | | --------MPAETVRKEVALEYCRRVNAG------ELEGVLQL---------------------FAPDARLVDPLGTEPVVGRAALAARLAPGAVHEEPGRPYAAHDGTSVVLPATVTVGAPGAPPQRRGRTRVMGVIEVGEDGLIREDSSWTARPAPDEERRKELAREHCLRINDGDVDGLLKLTRTGLEALRAHATMAVGSNVRETAGLTVAGQDGRHAAVTVSATMDYLPSGPLLARHGIEYVMVIGVDADEMRAYWGATDVSLLDP------------- |
8 | 3anwB2 | 0.13 | 0.05 | 1.59 | 0.38 | HHsearch | | ---------------------------------------------------------------------------DETDKIIKVIAEERESE--PL--------TLLPEGL-YERAEFYAYYLENYVRLNP-----------------N-VK-LTKLANLRDKLIRFNKILKAVMLNSLELLSRLAPEERRIYLQMSKIRNEGDA------------------------------------------------------------------------------ |
9 | 3u1wA | 0.11 | 0.09 | 3.19 | 0.64 | SP3 | | ------QGIIPLPPVENAFQEKYPDAKN-PVFEIEGNYYVVDFNNG-----GSETTAWFTDQGIWEKIDISPAFKQSFYSTVDDTYAINRLNGIVYKIEAEQSNSEVDLYYSQYGNLIKAVDDEINNDAPIVIPKEVSNLEFANAELLDIQQNSLGYELDIDNQIYKVAQLNK--DY------RWQSTTWASEQEVPQIVQG----FESSAY--ASD----------KVQSIYTLLNA--NGTFYLFKVSHNGQDKTITFDVF---GNIV------------- |
10 | 3rgaA | 0.05 | 0.04 | 1.94 | 0.84 | PROSPECTOR2 | | -------HMPAETVRKEVALEYCRRVNAGARLVDPLGTEPVVLAPALRGAVHEEPGRPYAHDGTSVVLPATVTVGAPGAPPQRRGRTR-------VMGVIEVGEDGIREMRVMWGVTD---------------------------SSWTARPAPDEERRKELAR----EHCLRINDGDVDGLLKLTRTGLEALRAHATMAVGSNVRETAGLTVAGQDGRHAAVTVSATMDYLPSGPADPHRALIYVMVIGVDADEMRAYWGATDV-------------SLLDP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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