Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | TVWTKQNENVLKEIEKTGRYIAKKEYILKDLDEHAHLVLEVYDWLVKNTPNTTQKPYDAEYPIWVSLAREATMLPSVGTVLLELKVDPALITMVNINKWGAMLNYSYIPSDEQDAKNHRQLLKAYGVSSDTKAYMSQFYPQIKRRIIDSWHRLFDDSITLGSDEKYGNIWEVRKEWI |
1 | 3hjnA | 0.10 | 0.08 | 3.10 | 0.65 | SPARKS-K | | SGKSTQIQLLAQYLEKRGVILKRRKILLEEPKAELFLFLASRNLLVTEIKQYLSE---------------------------------GYAVLLDRYTDSSVAYQGFGRNLEIVEELNDFATDGLIPDLDVETALKRFEREFLERVREGYLVLAREHPERIVVLDGKRSIEEIHRDV |
2 | 1aipC | 0.15 | 0.13 | 4.38 | 0.58 | FFAS-3D | | -----SQMELIKKLREA--TGAGMMDVKRALEDAGWDEEKAVQLLRERKAAKKADREAREGIIGHYI-----HHNQRVGVLVELNCETDFVLAKDLAMHIAMMNPRYVSAEEELEKERQIYIQAALNEGKPQQIAE---KIAEGRLKKYLEELLEQPFVKDDKVK-------VKELI |
3 | 5n6uA4 | 0.10 | 0.05 | 1.90 | 0.23 | HHpred | | RVWGYENDIFYELCDELGIMVWQDFMFACAEYPDDENFLNDVQKEAEFVIKRLR----NHPSIVLWCGNNHWGYYA--------------------KWWGE--R--EKFWG---EEIYSRVLPDV---------------------------------------------------- |
4 | 1d2mA | 0.11 | 0.10 | 3.68 | 0.67 | MUSTER | | YLSPEGLEEILKEIEKE--LWERVRYFEEREVLYAQRLKERTLYDLEMLRVMG-TCPGVEN----YARYFTGKAPGEPPYTL-LDFPEDFLVFLD--ESHVTVPQ--LQGMYRGDYARKKTLVDYGFRLPSALDNRPLRFEEFLERVSQVVFVTPGPFELAHSGRVVEQIIRPTGLL |
5 | 4k9rA | 0.07 | 0.06 | 2.56 | 0.75 | CNFpred | | IRVYVNLDDIFAQAQKYTRFEAACTSDIVGIDHLTHSLKKAIEFIGATD----------YGRLRFVTKYEH-DARHNGKTRFRFSINSRYVI--------NHFEPGTS--SFDGRLAAARKVAGAGYKLGFVVAPIYRHEGWERGYFELFQELARQLEGMDLSDLTFELIQHRFTKP |
6 | 1vt4I3 | 0.12 | 0.09 | 3.19 | 1.06 | HHsearch-2 | | ------EYALHRSIVD-------HYNIPKTFDDLIPPY--LDQYFYSHIGHHLKNIEHPE------------RMTLFRMVFLDFRF-LEQKIRHDSTAWNASGSI----LNTLQQLKFY---K---------PYICDNDPKYERLVNAILDFLPKIEENLICIALMAEDEAIFEEAH |
7 | 4ttpA | 0.07 | 0.06 | 2.54 | 0.70 | Neff-PPAS | | ELTSKNTPCYQDIISHFGSSVVLRDIIFSNSNERLWLESLLHPVIRKKIEEQLIVC-TSPYCLIEIPLLFNKHHYPYLQKVLLVIAPLESQLDRIVKRDHC--------TKKQALAILATQPNLEQRLEAADDVLISGLSELKAKVNKLHQKYLREAKIKQ---------------- |
8 | 2l01A | 0.13 | 0.05 | 1.77 | 0.26 | HHsearch | | EKAGALAGQIWEALNGTEGLTQKQ--IKKATKLKDKDFFLGLGWLLREDKVVTS--------------------EVEGEIFVKLVLEHHHH--------HH---------------------------------------------------------------------------- |
9 | 3mwfA | 0.13 | 0.11 | 3.94 | 0.79 | SP3 | | VASKVRNEKVYDQLSKIATVSTDKDTTKKEAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKA-SVVNFRADHTRIYAGGYAILNFKRNKDLQKQVDNGKDIIVVKSDPNAKDAALVKKTESEWTSSNDDLDEITWNLAGGYKSSLKLIDDLYEKLNIEKQ------------------ |
10 | 3licA | 0.09 | 0.09 | 3.41 | 0.60 | PROSPECTOR2 | | ENYLSIEKRLYENLAQE------SSHSASRLQFLLEHAQANTQGLSDFIGLLADKDDINNDFFGSAIAFKPNTFPNKKLFSPYVYRSGSGFNYLDIGADGYDYTDGYFDEGAGNLDRLPEQLGIAPFHSDKEKVLAGWLDKQNIKNIAFATLLNDGQADDKGTVYLASVAEVAFASL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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