Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | VAVNSTLLTINAGDYIFYTDWMWTSFVVFSISQSTMLVVGAIYYMLFTGVPGTATYYATIMTIYTWVAKGAWFALGYPYDFIVVPVWIPSAMLLDLTYWATRRNKHAAIIIGGTLVGLSFPLFNMVNLLLVRDPLEVAFKYPRPTLPAYMTPIEPQVGKFYNSPVALGSGAGAVLSVPIAALG |
1 | 1yewB | 0.21 | 0.21 | 6.60 | 1.30 | MUSTER | | VGSYHIHAMLTMGDWDFWSDWKDRRLWVTVTPIVLVTFPAAVQSYLWERLPWGATVCVLGLLLGEWINRNFWGWTYFPINFVFPASLVPGAIILDTVLMLSGSYLF-TAIVGAMGWGLIFYPGNWPIIAPLHVPVIQGYNYVRTGTPEYIRMVEKGTLRTFGKDVAPVSAFSAFMSILIYFMW |
2 | 1yewB | 0.21 | 0.20 | 6.42 | 1.43 | Neff-PPAS | | VGSYHIHAMLTMGDWDFWSDWKDRRLWVTVTPIVLVTFPAAVQSYLWERLPWGATVCVLGLLLGEWINRNFWGWTYFPINFVFPASLVPGAIILDTVLMLSGSYLFTAI-VGAMGWGLIFYPGNWPIIAPLHVPDIQGYNYVRTGTPEYIRMVEKGTLRTFGKDVAPVSAF-------FSAFM |
3 | 1yewB | 0.23 | 0.22 | 7.01 | 1.00 | SP3 | | VGSYHIHAMLTMGDWDFWSDWKWV--TVTPIVLVTFPAAVQSYLWERYRLPWGATVCVLGLLLGEWINRNFWGWTYFPINFVFPASLVPGAIILDTVLMLSGSYLFTA-IVGAMGWGLIFPIIAPLMLMSIADIQGYN--YVRTGTPEYIRMVE--KGTFGKDVAPVSAFFSAFMSILIYFMW |
4 | 5d9qD | 0.08 | 0.08 | 3.18 | 0.96 | SPARKS-K | | LSCRASGYEFLNCPINWIRLAPGRRPEWMGWLKPVTMTRSDTAFLELRSLTSTAVYFCTRGKYCTARDYYNWDFEHWGAPVTVSVLTQSPATLSTAIISCRTSQSGSLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGADYNLSISNLESGDFGVYYCQQYEFFGQGTKVQV------ |
5 | 1yewB | 0.22 | 0.19 | 6.04 | 0.62 | FFAS-3D | | ---------LTMGDWDFWSDWKDRRLWVTVTPIVLVTFPAAVQSYLWERLPWGATVCVLGLLLGEWINRNFWGWTYFPINFVFPASLVPGAIILDTVLMLS-GSYLFTAIVGAMGWGLIFYPGNWPIIAPLHVPVEQGYNYVRTGTPEYIRMVEKGTLRTFGKDVAPVSA------------- |
6 | 3chxB | 0.21 | 0.19 | 6.09 | 0.44 | HHpred | | -------FMLTAGDWDFWVDWKDRRMTVVPILGVTAAAAQAFFW-ENFKLPFGATFAVSGLLIGEWINRNFWGWTYFPISLVFPSALVVPALWLDIIMLLSGSYVITAV-VGSLGWGLHQATEQHGQLMSLADL--VGFHFVRTSMPEYIRMVERGLRTFGKEVVPVAAFFSGFVSMMVYF-- |
7 | 3chxB | 0.18 | 0.17 | 5.70 | 1.28 | MUSTER | | LGGYHIHFMLTAGDWDFWVDWKDRRMWPTVVPILGVTFAAAAQAFFWEKLPFGATFAVSGLLIGEWINRNFWGWTYFPISLVFPSALVVPALWLDIIMLLSGSYVI-TAVVGSLGWGLLFYPNNWPAIAALHQATLVGFHFVRTSMPEYIRMVERGTLRTFGKEVVP-SGFVSMMVYFL-FVG |
8 | 5hm3A | 0.13 | 0.08 | 2.67 | 0.73 | CNFpred | | -------------AYLQYTSG-IPSGVQITHLNLPTNVVQVLNALEGQ---EGDRGVSWLPFFHDMGLITVLLASVLGHSFTFMT---PAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGV----------------------------------------------------- |
9 | 4oulA | 0.14 | 0.09 | 3.01 | 0.43 | HHsearch-2 | | VAFSAARTPGTLDQPIVFD------LLLNNLGETFNCPVNGTYVFIFHMLKLAVPLYVNLMK------NEEVL----------VSAYANDG----APDHETASNHAILQLFQGDQIWLRLH--R--GAIYGSSWKYSTF-------------------------------SGYLLYQDL---- |
10 | 3chxB | 0.17 | 0.16 | 5.38 | 1.39 | Neff-PPAS | | LGGYHIHFMLTAGDWDFWVDWKDRRMWPTVVPILGVTFAAAAQAFFWENLPFGATFAVSGLLIGEWINRNFWGWTYFPISLVFPSALVVPALWLDIIMLLSGSYVITAV-VGSLGWGLLFYPNNWPAIAALHQADLVGFHFVRTSMPEYIRMVERGTLRTFGKEVVPVAAF-------FSGFV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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