Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | DVLAGLLDGPRARGAFLLRSILNPPWSLRIQDRAPLTLVAMMRGQAWVIPDHGETVRLRPGDVAIMRGPDPYTVADDPATPPQVVIHPGQHCTTPEGESLAQEMDLGVRTWGNGPDGSTVMITGTYQMHGEISRRLLAALPALLVLPEDAWDCPLIPLLGAEIVKDEPGQEAVLDRLLDLLLIAVLRAWF |
1 | 2aacA | 0.14 | 0.12 | 3.96 | 1.71 | SPARKS-K | | -NDPLLPGYSFNAHLVAGLTPIEADFFIDRPGMKGYILNLTIRGQGVVKNQG-REFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFR-----PRAYWHEWLNWPSIFAN---------TGFFRPDEA----------------HQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRRMEAIN |
2 | 2aacA | 0.14 | 0.11 | 3.75 | 1.41 | FFAS-3D | | ---DPLLPGYSFNAHLVAGLTPYLDFFIDRPGMKGYILNLTIRGQGVVKNQG-REFVCRPGDILLFPPGEIHHYGRHPEAR--------------------------------------EWYHQWVYFRPRAYWHEWLNWPSIFANAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRRMEA-- |
3 | 2aacA | 0.15 | 0.12 | 3.91 | 0.88 | HHpred | | ------LPGYSFNAHLLTPINGYLDFFIDRPLGKGYILNLTIRGQGVVKNQG-REFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWV--YFR---PRAY----------W-------HEWLN-WPS--------I---FANTGFFRPDQHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRRMEAIN |
4 | 2aacA | 0.15 | 0.12 | 4.06 | 1.46 | MUSTER | | DPL---LPGYSFNALVAGLTPIEADFFIDRPGMKGYILNLTIRGQGVVKNQG-REFVCRPGDILLFPPGEIHHYGRHPEA------------------------------------REWYHQWVYFRPRAYWHEWLPSIFANTGFFRPDPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRRMEAIN |
5 | 3gbgA | 0.07 | 0.05 | 2.14 | 1.19 | CNFpred | | --------------FQTNVYRMSDTYIFNNLYINDYKMFWIDSGIAKLIDKNLVSYEINSSSIILLKKNSIQRFS--------LTSLS-----------------------------DENINVSVITISDSFIRSLKSYI-DLLLWNCEHNDIAVLSEVVNGFR-EINYSDEFLKVFFSGFFSKVEKKYN |
6 | 1xjaC | 0.15 | 0.12 | 4.08 | 0.78 | HHsearch-2 | | DPLLP---GYSFNAHLLTPIEGVLDFFIDPLGMKGYILNLTIRGQGVVKNQG-REFVCRPGDILLFPPGEIHHYGRHPEAREWYHQW---------------------VYFRPRAY-WHEW----L--NWP---SIF-ANTGFFRPDEQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRRMEAIN |
7 | 2aacA | 0.13 | 0.10 | 3.47 | 1.54 | Neff-PPAS | | ------FNAHLVAGLTPIEANGYLDFFIDRPGMKGYILNLTIRGQGVVKNQG-REFVCRPGDILLFPPGEIHHYGRHPEA------------------------------------REWYHQWVYFRPRAYWHEWLPSIFANTGFFRHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRRMEAIN |
8 | 5u93A | 0.15 | 0.12 | 3.92 | 1.14 | HHsearch | | KLLDDFFASDQQAV---AVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLND-RPYRITRGDLFYIHADDKHSYASVNDLVLQN------------------------IIYCP------ERLKLNLD--WQGAIPGFNAGQPHWRLGSGAQARQVIGQLEHESSQHVPFAN-EAELLFGQLV-LLNRHR- |
9 | 2arca | 0.16 | 0.13 | 4.35 | 1.47 | PROSPECTOR2 | | DPLLPGYSFNAHLVAGLTPIEANGYLIDRPLGMKGYILNLTIRGQGVVKNQG-REFVCRPGDILLFPPGEIHHYGRHPEAREW------------------------------------YHQWVYFRPRAYWHEWLNWPFANTGFFRPDEHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRRMEA-I |
10 | 5u93A | 0.16 | 0.11 | 3.69 | 1.18 | SAM | | ----------------VAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLND-RPYRITRGDLFYIHADDKHSYASVNDLVLQN------------------------IIYC------PERLKLNLDWQG--AIPGFNASQPHWRLGSG-QARQVIGQLEHESSQHVPFAN-EAELLFGQLV-LLNR--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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