Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | SVVDAIAQTMVGEWMFKYVRRRKSFGVPEGTLDNDASNGVRHKRWVWLAPYERAVMWSSKQPTSGSALMGKSGRKLTIQSVLDVKDDNAAPKGVNNLFNRSILILTPARALKFTATSRERHYIWLTALSFLAHS |
1 | 1maiA | 0.14 | 0.12 | 4.05 | 1.77 | SPARKS-K | | QDDPDLQALLKGSQLLKVKSS-----------------SWRRERFYKLQEDCKTIWQESRKVMRSPES-----QLFSIEDIQEVRMGHRFARDIPEDRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLRKIIH- |
2 | 1maiA | 0.15 | 0.12 | 4.03 | 1.40 | FFAS-3D | | ---PDLQALLKGSQLLKVKSS-----------------SWRRERFYKLQEDCKTIWQESRKVMRS-----PESQLFSIEDIQEVRMGHRTARDIPEDRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLRKIIH- |
3 | 1maiA | 0.15 | 0.12 | 4.04 | 1.30 | HHpred | | QDDPDLQALLKGSQLLKVKSS-----------------SWRRERFYKLQEDCKTIWQESRKVMR-----SPESQLFSIEDIQEVRMGHRTERD--IPEDRCFSIVFKRNTLDLIAPSPADAQHWVQGLRKIIH- |
4 | 1maiA | 0.14 | 0.12 | 4.05 | 1.93 | MUSTER | | QDDPDLQALLKGSQLLKVKSS-----------------SWRRERFYKLQEDCKTIWQESR-----KVMRSPESQLFSIEDIQEVRMGHRTEFARDIPEDRCFSIVFKDNTLDLIAPSPADAQHWVQGLRKIIH- |
5 | 1maiA | 0.16 | 0.13 | 4.22 | 1.40 | CNFpred | | --DPDLQALLKGSQLLKVKSS-----------------SWRRERFYKLQEDCKTIWQESRKVMRSPE-----SQLFSIEDIQEVRMGH-RTEGLE-PEDRCFSIVFKRNTLDLIAPSPADAQHWVQGLRKIIH- |
6 | 1maiA | 0.14 | 0.12 | 4.05 | 0.88 | HHsearch-2 | | QDDPDLQALLKGSQLLKVKSSS-----------------WRRERFYKLQEDCKTIWQESRKVMRS-----PESQLFSIEDIQEVRMGHRTEGARDIPEDRCFSIVFKRNTLDLIAPSPADAQHWVQGLRKIIH- |
7 | 1maiA | 0.14 | 0.12 | 4.05 | 2.05 | Neff-PPAS | | QDDPDLQALLKGSQLLKVKSS-----------------SWRRERFYKLQEDCKTIWQESRKVMRS-----PESQLFSIEDIQEVRMGHRFARDIPEDRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLRKIIH- |
8 | 1maiA | 0.14 | 0.12 | 4.05 | 1.40 | HHsearch | | QDDPDLQALLKGSQLLKVKSSS-----------------WRRERFYKLQEDCKTIWQESRKVMRS-----PESQLFSIEDIQEVRMGHRTEGARDIPEDRCFSIVFKRNTLDLIAPSPADAQHWVQGLRKIIH- |
9 | 1mai | 0.14 | 0.11 | 3.85 | 1.11 | PROSPECTOR2 | | GLDPDLQALLKGSQLLKVKSS-----------------SWRRERFYKLQEDCKTIWQESRKVMRS-----PESQLFSIEDIQEVRMGHRTARDIPEDRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLRKII-H |
10 | 1maiA | 0.14 | 0.11 | 3.83 | 0.79 | SAM | | -DDPDLQALLKGSQLLKVKSS-----------------SWRRERFYKLQEDCKTIWQESRKVMRS-----PESQLFSIEDIQEVRMGHRTEGARDIPEDRCFSIVFKRNTLDLIAPSPADAQHWVQGLRKI--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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