Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | PYTDFGFKKLFGTEMNKDLLISFINSLLSGKEVVKDLTYLNTEHLGTSEADRKAVFDVYCENENGEKILVEMQRGEQQFFKDRSLYYATFPIREQGQKGEWNYRLKAVYVIGILNFTFDEQSNDYYHHEVKLIDTRTKEVFYDKLTFIYLEMPKFNKKEEELNDMFEKWLFVLRNLSRLLERPKALQERIFTKLFEAAEVAKFTKAEYDSYEESLKVYRDWINTIETA |
1 | 3s1sA | 0.09 | 0.08 | 3.01 | 0.88 | SPARKS-K | | VFSYLPSYGDDEVSVYHPICEAALNQALVNTGLDSTYEVVHHELVG------SIEADFVIKNTKKYLLIVEVKRT-KSQVSSTRYRLQAQSYVREANIKV-----EQHYYCLTNLE---------IIDFFKH-DPNKPVVSQQIIEPSPIVVGNFSDTVSEFYNRLVEAFQNIIDIDAGTYK------SSTANLVDILENRKDNSTSWHQALVVAGYEYIRGVLRGQN |
2 | 2p14A | 0.13 | 0.10 | 3.50 | 0.89 | FFAS-3D | | -MQDILYEEVEKTINPPNYFEWNTYRVFSYKNLVPNFKLDDSGHPIGNAIPGVE--DILVEYEH-FSILIECSLTIGEKQLDYEGDSVVRHLQEYKKKG------IEAYTLFLGK-------------SIDLSFARHIGFNKESEPVIPLT--------------VDQFKKLVTQLKGDGEH---FNPNKLKEILIKLLRSDLGYDQAEEWLTFIEYN---------- |
3 | 5gkeA2 | 0.12 | 0.06 | 2.03 | 0.37 | HHpred | | ----------LALTGSEAEMAELIFENPEIEPGFKPL---FREKA-----IGTGIVAVLGRDSDGNIVVLELKRRAELHAVRQLKSYVEILREEY---------GDKVRGILVAPS-LTSG-AKRLLE---------------KEGLEFRKLEPPK------------------------------------------------------------------------ |
4 | 6bzfA | 0.12 | 0.10 | 3.43 | 0.70 | MUSTER | | ------------------------------SEFFWDVQKI--QEISNVEEHSVVCVTVNT-----SRLISQLNEELQDNFIVTQLQLLINNVYEKIQKSPGVPA-HRSLMINLN-FTRLKFSIAYWDILLERSLDLINGPSKTGARYFITEVTPVDRSRVENNQYFLAFKANQRLTRNSVDMDEFIDILIKQIIFDLFKKNGIPDQDFEAILSRFHNLESLVVAFNE- |
5 | 2g18A | 0.10 | 0.07 | 2.77 | 0.69 | CNFpred | | --QHPLIRQL------ADCIEEVWHQHLD-PAELGYVEGRL--------EGEKLTIENRCYQTQFRKMHLELAKVG-----------------------------NMLDILHCVMFPRPE--YDLPMFGCDLVGG------RGQISAAIADLSPVRTLPESYNSAL-EWGNIFSDFCIFVRPSSPEEEAMFLGRVREFLQVH-SAEQKQQILAGQHNYCSKQQQNDKT |
6 | 1vt4I3 | 0.08 | 0.05 | 2.05 | 0.47 | HHsearch-2 | | ---------------EYALHRSIVDHYNPK--TFDSDDLIPPYLD--------------------------------QYFYSH--------IGHHLKNI-EH---PERMTLFRMVFLDFRFLEQKIRHDSTAWN----AS-------------------GSILNTLQQLKFYKPYICDDPKYERLV-NAILDFLPKIEENLICSKYTDLLRIALMAAIFEEAHKQVQR |
7 | 5cwmA | 0.09 | 0.07 | 2.89 | 0.75 | Neff-PPAS | | VKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEGD----------------------------PEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELEKQGDPEVARRAVELVKRVAESEEAKERAERVREEARELQERVKEL |
8 | 5gkeA2 | 0.09 | 0.04 | 1.69 | 0.70 | HHsearch | | ------DYEELALTGSEAEMAELIFENPEPGFKPLFREK-----AI-----GTGIVAVLGRDSDGNIVVLELKRRRALHAVRQLKSYVEILREEY---G------DKVRGILVAPS-LTSG-AKRLLE-------K------EG--LEFRKLEPPKR----------------------------------------------------------------------- |
9 | 6bzfA | 0.11 | 0.09 | 3.30 | 0.71 | SP3 | | ------------------------------SEFFWDVQKIQEISNVEEHSVVCVTVNLNEELQDEE---------SGVNFIVTQLQLLINNVYEKIQKSPG--VPAHRSLMINLNFTRLKFSIAYWDILLERSLDLINGPSKTGARYFITEVTPVDRSRYVENNYFLAFKANQRLTRNSVDMDEFIDILIKQIIFDLFKKNGIPDQDFEAILSRFHNLESLVVAFNE- |
10 | 6defA | 0.10 | 0.10 | 3.57 | 0.80 | PROSPECTOR2 | | ISDPNLIKLVVGVNNPIDLPQSVLENIVGRDFRPLVLQLINRQSSDADSTDKAANLDEWGEFLHLP--------GQKFYDFNKIRDEINRETEAKVGRNAGISPAPINLRIYSPHTRVPVGDQPRDIERLAVTAANVDEVDPEGQRTIGVLMDEGTDVVDILAGALEAEKAFFENHKAYRNKSAYCGTPYLQKYQQELEALGPSVRRRKECQQMVESLQRAAEIVSQV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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