Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MDTQTQTKVTVGCSCNPCKCQPLCKCGTTAACNCQPCENCDPCSCNPCKCGVTESCGCNPCKCAE |
1 | 4mt2A | 0.43 | 0.35 | 10.37 | 2.12 | SPARKS-K | | MDPN--------CSCASCSCAGSCKC---KQCKCTSCKK-SCCSCCPCKCSQGCICKEASCSCCA |
2 | 5fmaA2 | 0.40 | 0.34 | 9.98 | 1.84 | MUSTER | | ----------VPCSPSPCQNGGTCTGDVTHECACLPEENIDDCPGNNCKNGGACVDGVNTCRCPP |
3 | 5ml1A | 0.40 | 0.32 | 9.54 | 2.71 | CNFpred | | ---------TDTCKQTPCGCGSGCNC--KEDCRCQSCSTACKCAAGSCKCGKGCSCKCDSCSCK- |
4 | 5ml1A | 0.34 | 0.34 | 10.14 | 2.07 | Neff-PPAS | | MSSVFGAGCTDVCKQTPCGCASGCNCTDDCKCQKYGAGCTDTCKQTPCGCGCKEDCRCTACKCAA |
5 | 5ml1A | 0.41 | 0.40 | 11.78 | 2.03 | SPARKS-K | | MSSVFGAGCTDVCKQTPCNCTDDCKCGCGSGCNCKECQSCTACKCASCKCGKGDSCKCRSCSCK- |
6 | 4mt2A | 0.31 | 0.22 | 6.51 | 0.32 | FFAS-3D | | --------------------DPNCSCATDGSCSCAGSCKCKQCKCTSCKKSCCSCCPVGCAKCSQ |
7 | 5ml1A | 0.36 | 0.35 | 10.54 | 0.29 | HHpred | | MSSVFGAGCTDVCKQTPCGCASGCNCTDDCKCKQTPCGSCSACKCGSCKCGKPDSCKCDRCSCK- |
8 | 4mt2A | 0.43 | 0.35 | 10.37 | 1.74 | MUSTER | | MDPN--------CSCATCSCAGSCKC---KQCKCTSCKKSC-CSCCPCKCSQGCICKEASDKCSC |
9 | 5mn3A | 0.40 | 0.32 | 9.54 | 2.39 | CNFpred | | ---------TDTCKQTPCGCGSGCNCKE--DCRCQSCKYTDVCKQTPCGCATS-GCNCTDCKCQS |
10 | 1dftA | 0.37 | 0.17 | 5.03 | 0.83 | HHsearch-2 | | -------------------MDPNCSCSTGGSCTCTSSCACKNCKCTSCK---------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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