Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MDKLYAAIFGVFMGSPEDDLTDFIEIVKSVLSDEKTVTSTNNTGCWGWYWLIIIFFIVIILLLLIYLYLKVV |
1 | 3nufA | 0.07 | 0.07 | 2.88 | 0.77 | SPARKS-K | | ATALVNYVIKLAAAATDLQLQVLTNHLIGRSKSGEQLPAVDPTFVSQKSLDLADQVVQHIKYVLSIHFEAAQ |
2 | 1gkzA1 | 0.17 | 0.17 | 5.46 | 0.56 | FFAS-3D | | --ELYIRAFQKLTDKDQADEAQYCQLVRQLLDDHKDSRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLAL- |
3 | 1t06A2 | 0.18 | 0.12 | 4.07 | 0.30 | HHpred | | --SCYCWLLGNDNAFSESKISDMLEMVKDTIHHSPERTKS-----A-MNNFLNTV--AIS------------ |
4 | 4pqiA2 | 0.12 | 0.12 | 4.38 | 0.67 | MUSTER | | TDKFNGTVYTAFKGDLAKEAGPAFDHLENALHKFDDGPFFLGKEFSLVDIAYIPFVERLNIFLLEVFKYDIT |
5 | 4av3A | 0.13 | 0.12 | 4.32 | 0.60 | CNFpred | | --GLGADLLESFVGA--IVSSIILASYMFPIYVQKENLVHQVPKETIQALISYPIFFALVGLGCSMLGILYV |
6 | 2zxeB | 0.25 | 0.10 | 3.01 | 0.28 | HHsearch-2 | | --------------------------------------------RTGSSWFKIFLFYLIFAGIFQVLLLTLS |
7 | 2xndJ | 0.12 | 0.12 | 4.38 | 0.76 | Neff-PPAS | | IDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILF |
8 | 3nw0A1 | 0.22 | 0.17 | 5.26 | 0.50 | HHsearch | | VKRLQTHCYKVH-NATVDKLEDFINNINSVLESLYIEIKRGVTEDDGRIYALVNLA---------------- |
9 | 2wwbB | 0.10 | 0.08 | 3.11 | 0.78 | SP3 | | MDQ---------VMQFVEPSRQFVKDSIRLVK-RCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIPIN |
10 | 4pqiA2 | 0.12 | 0.12 | 4.38 | 0.42 | PROSPECTOR2 | | TDKFNGTVYTAFKGDLAKEAGPAFDHLENALHKFDDGPFFLGKEFSLVDIAYIPFVERLNIFLLEVFKYDIT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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