Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | NLISTAYGLDPNNVQGGPSWLEMDRFDIVAKAPAKSNQADLKLMLKSLLANRFALIAHNGTAPMPAYALGVIPGGKPKMTESDGTAQTGCVPHPPPQNEAPGVVSNIVVTCHNMTMETFAEMVHMMAGGYLANPVVDATGLKGSWDFDLTWTGKGQLQKAGADGISIFDALQKQLGLNLELKTAPRAVLIVDSV |
1 | 6csxB2 | 0.08 | 0.07 | 2.68 | 0.78 | SPARKS-K | | --------------------SSSFLMVVGVINTGTMTQEDISDYVAANMKDAISFGSQYGENYQPASGLGIKLATGANIRAELAKMEPFFPSGIVYPYLPDEDQGVFMTMVQGATTQKVLNEVTHYYLTKEKESVFAVNGFQNTGIAFVSLKDWADRPGEENKVEAITMRATRAF------SQIKAMVFAFNLP |
2 | 3tljA | 0.09 | 0.08 | 2.93 | 0.54 | FFAS-3D | | RIKDFVSSLPVEQFVK-----VSETFAVRSFRKGDHTSIDIARTVGEAIFERLSPLVNLDHPAVIFRALGIDTTGDSSLHKRPWRVYDHPAHLK-----------------------ASIANAMIELAELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNAGVQLSQYVDSVDFAISN-- |
3 | 3gr5A1 | 0.08 | 0.03 | 1.23 | 0.33 | HHpred | | -----------------------------------------------------------------------------------------------------LGKNEYFIITKSSPVRAILNDFAA----NYSIPVFISSSVNDDFSGEIKNEKP----------VKVLEKLSKLYHLTWYYDEN---ILYIYKT |
4 | 3niwA | 0.11 | 0.09 | 3.19 | 0.69 | MUSTER | | GIVPLANELRNEFGGGGEIINWESK-----EYENVLPNEVVPVLYECARTN---LSILTYDGA-----EIVTENSLDPYVQKEAFLNKAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKIN--VF----RSEPYFLELVP--------QGIDKALSLSVLLENIG-------TREEVIAIDGY |
5 | 5jjbA | 0.07 | 0.05 | 1.90 | 0.77 | CNFpred | | ------------------------TLGVLVCCPADVDGPALRHDVEAAIRKVLDVSIERS-EPSTHTIFVLGR----PITAA--------------------------------AFGAVAREVAALGVNIDLIRGVSDY-PVIGLELRVSVPPGADGAL-----RTALNRVSSEEHVDVAVED-AKRLIVFDVD |
6 | 3gr5A | 0.10 | 0.04 | 1.54 | 0.51 | HHsearch-2 | | ------------------------------------------------------------------------------MSSLE-------------K-RL-GKNEY-FIITKSSPVRAILNDFAA----NYSIPVFISSSVNDDFSGEIKNE--KPV--------KVLEKLSKLYHLTWYYDE---NILYIYKT |
7 | 5cw9A | 0.08 | 0.06 | 2.28 | 0.77 | Neff-PPAS | | ------------------------EMDIRFR---GDDPEAYYKALREMIRQARKF-----AGTVTVTLIIRFRGDDLEALEKALKEMIRQARKFAGTVTYTLDGNDLEIRITGVPPQVILELVKEAIRLAKEF--------NITVTVELVIRITGVPEQVRKELAKEAERLAKEFNITVTYTIRL--------- |
8 | 3jc8Qa | 0.09 | 0.04 | 1.36 | 0.59 | HHsearch | | ----------------------------------------------------------------------------------------------------YRGKRV-SFEFKDIDIQNLLRVIAE----ISKKNIVVADDVSGKVTIRLR--NVPW--------DQALDLVLRTKALGKEEFGNI---IRIAP- |
9 | 4czeA | 0.13 | 0.10 | 3.56 | 0.94 | SP3 | | MAAAIGAGLPIHELSLS---------GIVYSRSVRVGGDKMDEAIISYMRRHHNLLIGETT-----------------AERIKKEIGTARAPEGLSIDVKGRDLMQGVPREVRISEKQAADALAEPVGQIVEA--VKV---------ALEATPPELASDIADKGRGLDAEIRDHTGLPVTVADDP------LSC |
10 | 3licA | 0.15 | 0.14 | 4.69 | 0.69 | PROSPECTOR2 | | ELAQESSHS-ASRLQ---FLLEHDFIGLLADKDDINNPEKLKTVLTNRIQRLFSPYVYRSGSGFNYLDIGADGYDYTKAINQVGGYWSKAYFDEGAGNVLGVQPDYFGVTTVDLALDRLPEQLGIAPSRLV---VLDDQG-------RLIFHSDKEKVLAGWLDKQFATLLNDGQAGQASFVKGTVYLASVAEV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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