>PF12534 (328 residues) MIPVMEFRQFSEQQTAFRVLKPWWDVFTDYLSVMMLMIGVFGCTLQVMHDKIICLPQRIS LPPDNSSEVELKSPLHLQSNTSTVPTGLKTNLDLQQYSFINQMCYENALHWYAKYFPYLV LMHTLVFMVCSNFWFKFPGSSSKIEHFISMLGKCFDSPWTTRALSEVSGENPEEQDHKKD TASRSNIPMSPGEGSLEKTQSLRSIAEKIVVDQPSASVLDKKEGEQAKALFEKVKKFRLH VEEGDILYLMYVCQTVFKVFKFLLIIAYNSALVNNVNNTVHCNGIEEIQNMTGYKVFECN HTMAHLFSKLSCCYLFLVSVYGLTSLYT |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MIPVMEFRQFSEQQTAFRVLKPWWDVFTDYLSVMMLMIGVFGCTLQVMHDKIICLPQRISLPPDNSSEVELKSPLHLQSNTSTVPTGLKTNLDLQQYSFINQMCYENALHWYAKYFPYLVLMHTLVFMVCSNFWFKFPGSSSKIEHFISMLGKCFDSPWTTRALSEVSGENPEEQDHKKDTASRSNIPMSPGEGSLEKTQSLRSIAEKIVVDQPSASVLDKKEGEQAKALFEKVKKFRLHVEEGDILYLMYVCQTVFKVFKFLLIIAYNSALVNNVNNTVHCNGIEEIQNMTGYKVFECNHTMAHLFSKLSCCYLFLVSVYGLTSLYT | |||||||||||||||||||
1 | 6g9lA | 0.62 | 0.47 | 13.44 | 3.12 | SPARKS-K | --------------PAYRILKPWWDVFTDYISIVMLMIAVFGGTLQVTQDKMICLPCKWVTKDSCND--------------STGPTGIKYDLDRHQYNYVDAVCYENRLHWFAKYFPYLVLLHTLIFLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSET-------------------------------------------------GVLDKKEGEQAKALFEKVKKFRTHVEEGDIVYRLYMRQTIIKVIKFALIICYTVYYVHNIKFDVDCTVDIE--SLTGYRTYRCAHPLATLFKILASFYISLVIFYGLICMYT | |||||||||||||
2 | 6g9lA1 | 0.62 | 0.47 | 13.52 | 3.26 | FFAS-3D | --------------PAYRILKPWWDVFTDYISIVMLMIAVFGGTLQVTQDKMICLPCKWVTKDSC--------------NDSTGPTGIKYDLDRHQYNYVDAVCYENRLHWFAKYFPYLVLLHTLIFLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSE-------------------------------------------------TGVLDKKEGEQAKALFEKVKKFRTHVEEGDIVYRLYMRQTIIKVIKFALIICYTVYYVHNIKFDVDCTV--DIESLTGYRTYRCAHPLATLFKILASFYISLVIFYGLICMYT | |||||||||||||
3 | 6g9lA1 | 0.62 | 0.47 | 13.44 | 12.43 | HHpred | --------------PAYRILKPWWDVFTDYISIVMLMIAVFGGTLQVTQDKMICLPCKWVTKDSCN--------------DSTGPTGIKYDLDRHQYNYVDAVCYENRLHWFAKYFPYLVLLHTLIFLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSE-------------------------------------------------TGVLDKKEGEQAKALFEKVKKFRTHVEEGDIVYRLYMRQTIIKVIKFALIICYTVYYVHNIKFDVDCTV--DIESLTGYRTYRCAHPLATLFKILASFYISLVIFYGLICMYT | |||||||||||||
4 | 6g9lA1 | 0.62 | 0.47 | 13.52 | 2.31 | MUSTER | --------------PAYRILKPWWDVFTDYISIVMLMIAVFGGTLQVTQDKMICLPCKWVTKDSC--------------NDSTGPTGIKYDLDRHQYNYVDAVCYENRLHWFAKYFPYLVLLHTLIFLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSET-------------------------------------------------GVLDKKEGEQAKALFEKVKKFRTHVEEGDIVYRLYMRQTIIKVIKFALIICYTVYYVHNIKFDVDCTV--DIESLTGYRTYRCAHPLATLFKILASFYISLVIFYGLICMYT | |||||||||||||
5 | 6g9oA | 0.61 | 0.46 | 13.27 | 2.01 | CNFpred | --------------PAYRILKPWWDVFTDYISIVMLMIAVFGGTLQVTQDKMICLPCKWVTKDSCNDS--------------TGPTGIKYDLDRHQYNYVDAVCYENRLHWFAKYFPYLVLLHTLIFLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSET-------------------------------------------------GVLDKKEGEQAKALFEKVKKFRTHVEEGDIVYRLYMRQTIIKVIKFALIICYTVYYVHNIKFDVDCTVDI--ESLTGYRTYRCAHPLATLFKILASFYISLVIFYGLICMYT | |||||||||||||
6 | 6g9lA | 0.62 | 0.47 | 13.44 | 5.54 | HHsearch-2 | --------------PAYRILKPWWDVFTDYISIVMLMIAVFGGTLQVTQDKMICLPCKWVTKDSCN--------------DSTGPTGIKYDLDRHQYNYVDAVCYENRLHWFAKYFPYLVLLHTLIFLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSET-------------------------------------------------GVLDKKEGEQAKALFEKVKKFRTHVEEGDIVYRLYMRQTIIKVIKFALIICYTVYYVHNIKFDVDCTV--DIESLTGYRTYRCAHPLATLFKILASFYISLVIFYGLICMYT | |||||||||||||
7 | 6g9lA1 | 0.61 | 0.47 | 13.35 | 3.34 | Neff-PPAS | --------------PAYRILKPWWDVFTDYISIVMLMIAVFGGTLQVTQDKMICLPCKWVTKDSCNDS--------------TGPTGIKYDLDRHQYNYVDAVCYENRLHWFAKYFPYLVLLHTLIFLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSET-------------------------------------------------GVLDKKEGEQAKALFEKVKKFRTHVEEGDIVYRLYMRQTIIKVIKFALIICYTVYYVHNIKFDVDCTVDIE--SLTGYRTYRCAHPLATLFKILASFYISLVIFYGLICMYT | |||||||||||||
8 | 6g9lA | 0.62 | 0.47 | 13.35 | 8.58 | HHsearch | --------------PAYRILKPWWDVFTDYISIVMLMIAVFGGTLQVTQDKMICLPCKWVTKDSCN--------------DSTGPTGIKYDLDRHQYNYVDAVCYENRLHWFAKYFPYLVLLHTLIFLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSET-------------------------------------------------GVLDKKEGEQAKALFEKVKKFRTHVEEGDIVYRLYMRQTIIKVIKFALIICYTVYYVHNIKFDVDCTV--DIESLTGYRTYRCAHPLATLFKILASFYISLVIFYGLICMY- | |||||||||||||
9 | 6g9lA1 | 0.62 | 0.47 | 13.44 | 2.51 | PROSPECTOR2 | --------------PAYRILKPWWDVFTDYISIVMLMIAVFGGTLQVTQDKMICLPCKWVTKDSCND--------------STGPTGIKYDLDRHQYNYVDAVCYENRLHWFAKYFPYLVLLHTLIFLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSE-------------------------------------------------TGVLDKKEGEQAKALFEKVKKFRTHVEEGDIVYRLYMRQTIIKVIKFALIICYTVYYVHNIKFDVDCTV--DIESLTGYRTYRCAHPLATLFKILASFYISLVIFYGLICMYT | |||||||||||||
10 | 6g9lA1 | 0.62 | 0.47 | 13.43 | 3.06 | SAM | ---------------AYRILKPWWDVFTDYISIVMLMIAVFGGTLQVTQDKMICLPCKWVTKDSCN---------------STGPTGIKYDLDRHQYNYVDAVCYENRLHWFAKYFPYLVLLHTLIFLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSE-------------------------------------------------TGVLDKKEGEQAKALFEKVKKFRTHVEEGDIVYRLYMRQTIIKVIKFALIICYTVYYVHNIKFDVDCTV--DIESLTGYRTYRCAHPLATLFKILASFYISLVIFYGLICMYT | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |