Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | ADHERLWLNLAGYCVRPGFGYPLDDWRVEQLWSLYEQGIQYVNESQIWSEWWTLWRRAAGGLDESAQLRLLDDMAFYLQPPGSTRYKRPAGPARAGYADMVRLAGSLERIPAERKIELAEWLLARLRKPSENSQGWWAVGRIGARRPFYGSAHSVVPAEVAAQWLEAILALDWKKVEPAAFAAVQIARMTGDRSRDLSPEIRASVVRRLEAAHAPQSWIAMVRETVELDEADEGRVFGESLPAGLKL |
1 | 1wa5B | 0.11 | 0.10 | 3.49 | 0.84 | SPARKS-K | | PSLIRTATWTLSNLCRPQPDWSVVSQALPTLAKLIY-----SMDTETLVDACWAISYLSD-GPQEAIQAVIDRLVELLSHE-----------STLVQTPALRAVGNIVTGNDLQTQVVINAVLPALRLSPKEKEACWTISNITAGNTEQIQAANL-----IPPLVKLLEVAEYKTKKEACWAISNASSGGLQRP---------DIIRYLVSQGCIKPLCDLLEI---ADNRIIEVTLDALENILKMG |
2 | 5gmkd | 0.07 | 0.06 | 2.34 | 0.86 | FFAS-3D | | RLDMGQWIRYAQFEIEQH--------DMRRARSIFERALLDSSFIPLWIRYIDAELKVK---CINHARNLMNRAIST---------------LPRVDKLWYKYLIVEESLN---NVEIVRSLYTKWCSLEPGVNAWNSFVDF---------EIRQKNWNGVREIYSKYVMAH--PQMQTWLKWVRFENRHGNTEF--TRSVYSLAIDTVANIWSDMEVAKLVNSFAHWEYERSSALYQIAIP----- |
3 | 3s4wA | 0.12 | 0.09 | 3.00 | 0.33 | HHpred | | ----------------------------DDLASLLQNQAVK------GRAVGTLLRAVLKGSPCLRRYKIYSCCIQLVESGD---------LQQDVASEIGLLMLEVHHFPGPLLVDLASDFVGAVREDRLVGKLPIILTALATKEVLCGK-GDLNGEEYKRQLIDTLCSVRWPQR--YMIQLTSVFK-----DVCLTPEEMNLVVAKVLTMKLNPLVYQLLVLS---------------------- |
4 | 5ifeC | 0.12 | 0.12 | 4.11 | 0.79 | MUSTER | | GKGLAAFLKAIGYLI-PLMDAEYANYYTREVMLILIREFQS-PDEEMKKIVLKVVKQCCGVEANYIKTEILPPFFKHFWQHRMAL-------DRRNYRQLVDTTVEL--ANKVGAAEIISRIVDDLKDEAEQKMVMETIEKIMGNL----GAADIDHEEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKDLISRTAVVMKTCQEEKLMGHLGVVLYEYLGE |
5 | 5wwmA | 0.12 | 0.10 | 3.43 | 0.89 | CNFpred | | PNSSVVWMNYMAFQLQ-----LSEIEKARELAERALKTINFREEAEKLNIWIAMLNLENTFGTEETLEEVFSRACQYM-----------------DSYTIHTKLLGIYEIKFDKAAELFKATAKKFG---EKVSIWVSWGDFLISH---------NEEQEARTILGNALKAPKRNHIEVVRKFAQLEFAKGD-----PERGRSLFEGLVADAPKRIDLWNVYVDQE--DKKKVEDLFERII------ |
6 | 2pffB | 0.14 | 0.14 | 4.69 | 0.72 | HHsearch-2 | | GSLEHVLLVIAKILPEPTEGFAADDEPTTELVGKYVSSLVPSKVGQFDQVLNCLLLQENDTTLVKTKELIKNYITARIMAKRPKKSAQLGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYL----KGATGHS-QGLVTAVAIAET--DSWESFFVSVRKAITVLFPNTSLPPSILEENNEGVPSEVQDYVNKTNSHLPAGKQV |
7 | 5dn7A | 0.07 | 0.06 | 2.51 | 0.80 | Neff-PPAS | | ---RTQAVEELKQLLGKFNPSSTPHASLVGFISLLYNLLDD-SNFKVVHGTLQVLHLLVIRLGQQFLGPVIAASVKVLADN-----------KLVIKQEYMKIFLKLMKEVG--PQRVLSLLLENLKHKHSREEVVNICICSLLTY----PSEDFDLPKLSFDLAPALVDSKRRVRQAALEAFAVLASSMGSGK-------TNVLFKAVDTVGVMNAVQARLARKTLPRLTQGFVEYAILMPS---- |
8 | 3s4wA1 | 0.12 | 0.10 | 3.55 | 0.46 | HHsearch | | --MDLKILS---------LATDKTTD---KLQEFL-QTLKDDDNQAVKRAVGTLLRAVLKGSPCLRRYKIYSCCIQLVESGDL--------QQDVASEIIGLLMLEVHHFPGPLLVDLASDFVGAVREDRLVNLLPIILTALATKEVLCGK-GDLNGEEYKRQLIDTLCSVRWPQRY--MIQLTSVFK-----DVCLTPEEMNLVVAKVLTMKLNLQEIPLVYQL---------LVLSSK---G--- |
9 | 5cwjA | 0.14 | 0.09 | 2.91 | 0.71 | SP3 | | -----------------------------------------------------------------DSEEEQERIRRILKEARKSGTEESLRQAIEDVAQLAKKSQ-----DSEVLEEAIRVILRIAKESGSEEALRQAIRAV-AEI-----AKEAQDSEVLEEAIRVILRISEEALRQAIRAVAEIAKEAQD------PRVLEEAIRVIRQISGSEEARRQAERAEE-EIRRRAQ------------ |
10 | 5ctqA2 | 0.11 | 0.10 | 3.62 | 0.80 | PROSPECTOR2 | | WTVAL-WSRYLLAMERHG----VDHQVISVTFKALNAGF---IQATDYVEIWQAYLDYQDSSKELEERAAFTRALEYLKQEVEERFNESGDPSC----VIMQNWARIEARLCNNMQKARELWDSIMTRGNAKYANMWLERAHG-------------DTQHCRKALHRAVQCTSDYPEHVCEVLLTMERTEGSL--EDWDIAVQKTETRLARVNEQRMKAAEKEAALVQQEEEKAEQRKRARAEKKAL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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