Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | YHQILQQSFQHQWQQRQAWRFAMQQLEAYEAGVSYHSFNLDDATSPSGKNWQFSLLEQQQSGECRQVTARVMTPRRYQATLNRWFC |
1 | 3ci0I | 0.10 | 0.09 | 3.41 | 1.14 | SPARKS-K | | --------QHVLEEKTVAGWVAENQTALLYLTRGQRAVRQQGESDAG-SRWYWRTTPLSTGNALQAVDIEVSLHSSVIQSRRAWFS |
2 | 3ci0I | 0.10 | 0.09 | 3.41 | 1.41 | Neff-PPAS | | --------QHVLEEKTVAGWVAENQTALLYLT-RGQRAVRQQGESDAGSRWYWRTTPLSTGNALQAVDIEVSLHEDFSSVIQSRRA |
3 | 5bw0B | 0.14 | 0.13 | 4.37 | 1.10 | SPARKS-K | | -------NASRLEDKTLAMWIADNRLNELQLEQPPSSGRNQGELEFAGRRWEWRTQVDSTEQDMRRVIVWVAAKPLAAARLVGFLG |
4 | 3ci0I | 0.09 | 0.08 | 3.06 | 0.68 | FFAS-3D | | ---------HVLEEKTVAGWVAENQTALLYLTRGQRAVRQQGESDA-GSRWYWRTTPLSTGNALQAVDIEVSLHEDFSSVIQSR-- |
5 | 2mb7A | 0.05 | 0.02 | 1.14 | 0.31 | HHpred | | --------------------------------------RKRWECPALPQGWEREEVPRRSGLSAGHRDVFYYSPSGKKFRSK---- |
6 | 3u9sA | 0.16 | 0.16 | 5.40 | 0.89 | MUSTER | | QDDLLPAPQALPEHFWQAAAEAWLQSEPGHRRDDDPHSPWSRNDGWRSALARESDLMLRCRDERRCVRLRHASPSQYRLDGDDLVS |
7 | 5mu3A | 0.12 | 0.09 | 3.29 | 0.59 | CNFpred | | SDSNIMKFANLCYKDLLKVHSRVQFFRKLE--------------GNYVNDKQYSLLHIDN--MGLNVSFRLG---ADIIKIKVDDG |
8 | 2ky8A | 0.06 | 0.03 | 1.52 | 0.54 | HHsearch-2 | | ------------------------------------DKQGRTDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPYFD |
9 | 5g2fA | 0.06 | 0.06 | 2.48 | 1.07 | Neff-PPAS | | -----ANLAAGQSYVRNVALALEAQRDPSTGALPTHLTDCLSGFGQRPKTVTACTITYLNAL---DYVIEASLDGAALKKVVYKSS |
10 | 2mb7A | 0.04 | 0.02 | 1.22 | 0.60 | HHsearch | | -----------------------------GSMER-----KRWECPALPQGWEREEVPRRSGLSAGHRDVFYYSPSGKKFRSKPYL- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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