Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | KLNNYFTFLIVKYMWKKVGNEDASLSKDSSINKLKTKTEDVNKIRDKILEDIQKKVQEFVKNKLKPTLAPRQTYSNVILLNVNNDKVWSMGANWALANLLDTSKINPLSFMLLKQTFDQND |
1 | 5b7iB | 0.18 | 0.17 | 5.38 | 0.71 | SPARKS-K | | ----DPSNTISDRIVARSVIEAARFIQSWEDADPDSLTEDQVLAAAGFAARLHEGLQATVLQRL-VDESNHEEYREFALLNADGRSPFADWGWWYIANVLATGRLA-----IFQDKFKQRY |
2 | 3ptjA | 0.08 | 0.07 | 2.64 | 0.50 | FFAS-3D | | ------------NILNDGPPKETYVVDDAGV----LSRVTKSDLKKLL-SDLEYRAFEYADQVLEKWYPSEEGNNKGIVVLITSQKEGAITGGPAFIEAVGENILDATVSENLPVLATDEK |
3 | 4tweA2 | 0.10 | 0.09 | 3.34 | 0.25 | HHpred | | -LRSFLQAAQQGALLE---QHSISLGPVTAVEKFEAEAAALGQRISTQVRMLNDQLMLLERTFLNPAFPEERYYSHVLWAP---RT----GSVVTFPGLSNACSDTSEAWAEVQRQLS--- |
4 | 5nvrA | 0.13 | 0.12 | 4.32 | 0.69 | MUSTER | | LFKCSEQLTLVRWLLKG-QQLEQLNQNFSEIENVSDSELEKSEIIRELLHLAANPIEPLFSGLLNFCIKNN--ADHLDEFCGNTSEVLFKISPELLLKLLTKEKPNGKLLAAVIEKIENGD |
5 | 1jwyA | 0.09 | 0.08 | 3.12 | 0.55 | CNFpred | | NPSVLEKALMEPR-----------ILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKAYFIGVLDISGFEIFKV---NSFEQLCINYTNEKLQQFFNHHMFKLEQ |
6 | 2pffB | 0.27 | 0.26 | 7.87 | 0.52 | HHsearch-2 | | ADDEPTTPAEVGKFLSKVGQFDQVL------NLCLTEFEEGNDIHAKLLQTTLVKTKELIKNYITARIMPFDKKSNSALFRANAQLVATDDYFEELRDLYQTYHVLVIKFELIRTTLDAEK |
7 | 3hgfA | 0.10 | 0.07 | 2.79 | 0.66 | Neff-PPAS | | EIEKKIENIVTKIDKKKYIYDNMKKLLNE-IAEIEKDKTSLEEVKNINMSYGKSLNKLFLEKI-KKKSENMIKSMEKYIKDLDEIKEQSPKAEMNT------------------------- |
8 | 3p8cA4 | 0.15 | 0.09 | 3.07 | 0.50 | HHsearch | | ---------------------------------------MESVFNHAIRHTVYAALQDFSQVTLREPLRQKNVIQSV-LQAI-----RKTVCDWETGHALPRRAVGPSSTYMVRTMIAKT- |
9 | 5w7gB | 0.08 | 0.07 | 2.98 | 0.53 | SP3 | | RQDSKDRYQYKQYIYRSIGG---IVPPEMAETVTANQTAQWEAGFTPYHKLRLAIKEICKTDGIPNIKGMYIAFGEKLLLKMKAGSASSDMIAEYINNAISATGISQETAQKIADFITSNY |
10 | 2jo7A2 | 0.13 | 0.13 | 4.57 | 0.51 | PROSPECTOR2 | | SVEAALDNLMIKVYEITKGTVESSAQGTDSEELKTLLLKFSEDLKEALLSSMKTQHDELLKKFAALTPTFLTSEDISGYLTVPEYGAPMNAAKWKIHGKLESSEVPANLKALVAELIEGHH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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