Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | LGTFSLQSLSANPKIRRAYINQTTELTVADEDAFGRFTAYMVTSQNFTWRLKSDNLEARALKLPISKGLKFTKDITLNGINNFQNNAVITDFQLPSDSPAGGINYVATTELYNPSPFKLGLGVVSFA |
1 | 6beaA1 | 0.12 | 0.09 | 3.36 | 0.80 | SPARKS-K | | -STVSTDPVTLNTEKTTLDVVINGDVTIETSDS----------DKDLNVTFGGHDITATST--VNQDFV---EGVKVSG----NKNVVINTITAQG----EGTYVRTAMVIDSTGDVVVNGGNFVAK |
2 | 3my2A | 0.15 | 0.13 | 4.24 | 0.57 | FFAS-3D | | --RLIAQHVEYYSDQAVSWFT-QPVLTTFD------------KDKIPTWSVKADKAKLT------NDRLYLYGHVEVNALVPDSQLRRITTDNAQINLVTQDVTSEDLVTLYGTTFNSSGLKRGNLR |
3 | 3butA | 0.07 | 0.04 | 1.62 | 0.36 | HHpred | | VADGYENSVTVKP-ASATTLKFS--LRLNNSFLREWWVTHIANGEKTKIRVAI-KPTIEI-GRD--VEVPVESEFTTK------------------------------------------------- |
4 | 5n8pA2 | 0.08 | 0.07 | 2.83 | 0.77 | MUSTER | | SDVFNL-TLSSSAALAAGTVALTVNIAATDTNTTAHVDTLTLQATSASIVVTGNGLNLTNTG---NTAVT---SFDA---SAVTGTGSAVTFVSANTTVGEVVTIRGSLTGSATANDTIIGGTLVYT |
5 | 3lycA | 0.09 | 0.07 | 2.74 | 1.00 | CNFpred | | SGIIQFH-DTASFTNLKIEIAGSGDFVGHKV-----------YCEELNGDMAGS-NTIVLGGTVGIAEFSIAGSGTVRAF-----DCTMDELECKIAG-SGDIEAFVVNKIKA---EIAGSGSVKYK |
6 | 1xo8A | 0.10 | 0.06 | 2.31 | 0.69 | HHsearch-2 | | IGKGKIPPGSLKA-KDMTALDIPV--VVPY-SILFNLARDVGVDWDIDYELQI-GLTIDLVGEF-TIPISSKGEIKLPTFKDFF------------------------------------------- |
7 | 4aq1A5 | 0.07 | 0.06 | 2.63 | 0.75 | Neff-PPAS | | -IKVDATSVKLSDEAVGGGEVEGVNQKTIKVSAVDQYGKEIKFGTKGKVTVTTNT------EGLVIKNVNSDNTIDFDSGNS--ATDQFVVVATKDKIVNGKVEVKYFKNASDTTPTSTKTITVNVV |
8 | 3butA | 0.07 | 0.04 | 1.64 | 0.80 | HHsearch | | VADGYENSVTVKP-ASATTLKFS--LRLNNSFLREWWVTHIANGEKTKIRVAI-KPTIEI-GRD--VEVPVESEFTTKLL----------------------------------------------- |
9 | 4aq1A3 | 0.09 | 0.09 | 3.25 | 0.74 | SP3 | | -------EVPVQVQNQGFTLVDNLSNAPQNTVAFNKAEKVTSMFAGETKTVAMYD---TKNGDPETKPVDFKDATV-RSLNPIIATAAINGSELLVTNAGQSGKASFEVTFKDNTKRTFTVDVKKEP |
10 | 3ideA2 | 0.15 | 0.13 | 4.48 | 0.56 | PROSPECTOR2 | | RYEIDLPSQRLPPVPATGTLTTLYEGNAD-------------IVNSTTVTGD----INFSLAEQPADETKFDFQLDFMGLDNDVPVVTVVSSVLATNDNYRGVSAKMTQSIPTKPITRVKLASVSFS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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