Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | ALPSFIDYFNGIYGFATGIKDIMNMIFKTDTGGDLTLDEILKNQQLLNDISGKLDGVNGSLNDLIAQGNLNTELSKEILKIANEQNQVLNDVNNKLDAINTMLRVYLPKITSMLSDVMKQNYALSLQIEYLSKQLQEISDKLDIINVNVLINSTLTEITPAYQRIKYVNEKFEELTF |
1 | 4uosA | 0.14 | 0.13 | 4.42 | 0.81 | SPARKS-K | | ----------------GDNEEVKKMLEKIEEIKKMLEKAIKKVKEMLEKMIKEIKKMGEDSEKILKKAKILKMVIELAEKILKKAKEMAEKILKKVKELKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEILKKAKEMAEKIMVIELAEKILKAKEMAEKILKKVKELGV |
2 | 1cunA | 0.08 | 0.07 | 2.94 | 1.16 | FFAS-3D | | MVHQFFRDMDDEESW---IKEKKLLVSSEDYGRD--LTGVQNLRKKHKRLEAELAAHEPAIQSVLDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQVEEEEAWINGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKENITAKMKGLKGKVSDLEKAAAQRKA--- |
3 | 4k1pA | 0.13 | 0.11 | 3.73 | 0.37 | HHpred | | YNPKLIDLNQEMMRYSIRFNSYYSKLYELA-------GNINEDEQSKADFTN---------------------AYGKLQLQVQSIQENMEQDLLELNRFKTVLDKDSNNLSIKADEAIKTLQG-SGDIVKLREDIKRIQGEIQAELTTILNRAADSQTREAALRIQQKQKELLPLIQ |
4 | 4uosA | 0.15 | 0.15 | 4.93 | 0.92 | MUSTER | | MLEKMIEEIKAIKKVKEMLEKMIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIELAEKILKKAKE--MAEKILKKVKELGVDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENSEKILKKAKEMAEKILKMVIEL-----AEKILKAKEMAEKILKKVKELGV |
5 | 5j1iA | 0.11 | 0.11 | 3.89 | 0.72 | CNFpred | | KLKTISLVIRGTQGAEEVLRAHEEQLKEAQA-VPATLPELEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHGERDVEVERWRERVAQLLQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQQLRQEQALLEEIERHGEKVEECQRFAKQYIN |
6 | 4k1pA | 0.12 | 0.11 | 4.02 | 0.52 | HHsearch-2 | | YNPKLIDLNQEMMRYSIRFNSYYSKLYEINE-DEQSK---ADFTNAYGKLQLQVQSIQENMEQDLLENNLSIKA-DEAIKTLQG-SGDIVKLREDIKRIQGEIQAELTTILNIVNAADSQTREAALRIQQKQKELLPLIQKLSQTEAEDQVSSFTELIDRQITTLETLLTDWKVLNN |
7 | 2iakA | 0.10 | 0.10 | 3.58 | 0.85 | Neff-PPAS | | NLTEEEVNMKFVQDLLNWVDEMQVQLDRTEWGSD--LPSVESHLENHKNVHRAIEEFESSLKEAKISEIQLKLSYTDKLHRLESQYAKLLNTSRNQERHLDTLHNFVTRATNELIWLNEKEESEVAYHAELMRELEQKEESIKAVQEIAEQHPARLTIEAYRAAMQTQWSWILQLCQ |
8 | 4k1pA | 0.13 | 0.12 | 4.14 | 0.57 | HHsearch | | AMSSLTNHQKFAKANVREWIDYNPKLIDLNQE---MMRYSIRFNSYYSKLYELAGNINESKADF-------TNAYGKLQLQVQSIQENMEQDLLELNRFKTVLDKDSNNLSIKADEAIKTLQG-SGDIVKLREDIKRIQGEIQAELTTILVNAADSQTREAALRIQQKQKELLPLI- |
9 | 1eq1A | 0.08 | 0.07 | 2.89 | 0.66 | SP3 | | GGNAFEEMEKHAKEFQKTFSEQFNSLVNSKNTQDF----NKALKDGSDSVLQQLSAFSSSLQGAIS--DANGKAKEALEQARQNVEKTAEELRKAHPDVEKEANAFKDKLQAAVQTTVQESQKLAKEVASMEETNKKLAPKIKQAYDDFVK--HAEEVQKKLHEAATKQ-------- |
10 | 2yfaA | 0.08 | 0.08 | 3.29 | 0.91 | PROSPECTOR2 | | GANGDDTAAANTLAKLDAFSKQQAYLATTFKSPENVYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQQLLQVRIDVSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVRQFRDAVANITTSRAMTVQGADIVKRSDALYQIER |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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