Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | TLRNLPAPAPLITDAVEVWLPPRIAEALHAHGIRTLADLTVRIPRRRRWWSAIAGLGVAGARRIEAFFAAHPALTERARALIVAVPSGSIVP |
1 | 3gfkB | 0.17 | 0.13 | 4.29 | 1.08 | MUSTER | | HMKEEDQKEKVLEMTIEE-LSVRSYNCLKRAGINTVQELANK---TEEDMMKVRNLGRKSLEEVKAKLEEL---------LGLR-------- |
2 | 2maxA | 0.13 | 0.13 | 4.49 | 1.29 | SP3 | | GDYAQRDDAKDLSAKIESNLSARCFNCLDKIGIKYVGELVLM---SEEELKGVKNMGKKSYDEIAEKLNDLPEQRESLKKRLEKLEDKGGND |
3 | 1ci4A | 0.11 | 0.09 | 3.17 | 0.93 | SPARKS-K | | SQKHRDFVAEPGEKPVGSLIGEVLGKKLEERGFDKAYVVLGQFLVLREWLKDTCGANAKQSRDCFGCLREWCDAFL---------------- |
4 | 2maxA | 0.19 | 0.13 | 4.22 | 0.65 | FFAS-3D | | --------------KIESMLSARCFNCLDKIGIKYVGELVLMSEEE---LKGVKNMGKKSYDEIAEKLNDLESLKKRLEKL----------- |
5 | 1doqA | 0.16 | 0.12 | 3.97 | 0.53 | HHpred | | ------EQEEELDLPLEELLSTRVLHSLKEEGIESVRALLA---LNLKDLKNIPGIGERSLEEIKEALEKKGFTLKE--------------- |
6 | 1wclA | 0.17 | 0.13 | 4.28 | 1.07 | MUSTER | | ----------EAHAAIDT-IDEDFATVLVEEGFSTLEELAYV---PMKELLEIEGLDEPTVEALRERAKNALATIAQAQEESLG-------- |
7 | 2w9mA | 0.18 | 0.12 | 3.88 | 0.60 | CNFpred | | ---------------------PKKIRSLWLAGIDSLERLREAAES--GELAGLKGFGAKSAATILENVVFLFQSLRAGLAVAE--------- |
8 | 3gfkB | 0.15 | 0.12 | 4.02 | 0.62 | HHsearch-2 | | HMKEEDQKEKVLEMTIEEDLSVRSYNCLKRAGINTVQELANK---TEEDMMKVRNLGRKSLEEVKAKLEELGLGLR---------------- |
9 | 3gfkB | 0.15 | 0.12 | 4.02 | 0.90 | Neff-PPAS | | HMKEEDQKEKVLEMTIEELLSVRSYNCLKRAGINTVQELANK---TEEDMMKVRNLGRKSLEEVKAKLEELGLGLR---------------- |
10 | 5tw1T | 0.19 | 0.11 | 3.51 | 0.89 | HHsearch | | ------------ID--DLDLTVRSYNCLKREGVHTVGELVAR---TESDLLDIRNFGQKSIDEVKIKLHQ---------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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