Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LLTNPNFKPDIVHVSYDEASTRQNPDICFAIGDYKTENYFLTQGLQELKLAITDFVEKRLNLKQLRSRENQRIFEDREWSPRVLCALVLRKYLYQAFLCGTDRVFIS |
1 | 5odwC1 | 0.11 | 0.10 | 3.70 | 0.72 | SPARKS-K | | ITHVQGGGRDIIQYIPARSSYGTPP-------FVPPGSPYVGTGMQEYRKLRSTLDKSHSELKKDFPQKSESMYQSQLLASRKFYGEFLDRHMSELAKAYSADIYK- |
2 | 3nbxX3 | 0.20 | 0.09 | 3.00 | 0.54 | FFAS-3D | | ---------------------------------------------GEIKQQLEELESDWRKQHALFSEQQKCLFIPGDWLGRIEASLQVGAQIRQA----------- |
3 | 2w61A3 | 0.22 | 0.15 | 4.73 | 0.25 | HHpred | | ---------------------SSFPNLGYFAGNQVTNDHTNTFASPFVKAAIRDAKEYISHSN-HRKIPVGYSTNDDAM---------TRDNLARYFVCGDVKAD-- |
4 | 4oojA1 | 0.11 | 0.09 | 3.38 | 0.66 | MUSTER | | ----KSLRDKVKSTVLSHYKDED---------RIDGE--KKDEKLNELITNLQNELVKELVKDPQYSKLSLSKDPRKEINYDYLVNSLIGDWIDTILDATVDSTVWV |
5 | 1v7vA | 0.19 | 0.15 | 4.81 | 0.51 | CNFpred | | ---------HCGSLHKQFTL--EEIRFAYILGIGKGNGERL-ANIDAAFAAIKAHWDERCAKFQVKS------------PNQGLDTMINAWTLYQAETCVVWSRFAS |
6 | 2pffB | 0.16 | 0.15 | 4.97 | 0.43 | HHsearch-2 | | IMAKRPFDSNSALFRAVGEGNAQLVAIEELRDLYQTYHVLVGDL---IKFSA----ETLSELIRTTLDAEKDYLLSIPISCPLIGVIQLAHYVVTAKLLGTPGELRS |
7 | 6hv6A1 | 0.12 | 0.11 | 3.94 | 0.66 | Neff-PPAS | | ---RIKYNQENFDTMQRMALDYAYNP------DSKGKIAQAQQAYKTGKEDYNAPQYDNFNGLSLDKKIERYISPDTDATTKGVLAGKMNESIKDINAFQTAKDAQS |
8 | 5bthA | 0.14 | 0.14 | 4.78 | 0.54 | HHsearch | | TSEGKKISSDIITFREIMTKILTDPGQLFIKSDDELRCEYVGYKFETIATIPKPWSQGIGNVKLVLAGEIDCCWDYRIINNSQVFEQKLFKAWCQCFLMGVTKIIY- |
9 | 5lhkA1 | 0.13 | 0.12 | 4.21 | 0.57 | SP3 | | RRRGFVARPGQVVAEPSADGRAVV--LNVGLGPAGSAT------AATFRAAAAASVRAVGPARTLLALADGSGVPAAERARAVAEGAVLGLYRYDEYRSPLAEVIVA |
10 | 2n4eA | 0.07 | 0.06 | 2.36 | 0.44 | PROSPECTOR2 | | MHHHHHHRSGDIQVQNNNTCNGKTFDYTYTVTTE-----------SELQKVLNELKDY------IKKQGCKRSRTSITARTKKEAEKFAAILIKVYAELGYNDINVD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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