Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | WVSHFFKSLWPSGDLRDLFGRYFPSLIRYYDKIEFVEKLTHCEVFVNELGMTDDKEQRDVVAEAADVLKNTLLKVAIKMSLDKTFRPAEEKKEERTTTTTVTSSAVGDVDERPAGTVSGPTIQAPSVTQENTVTSLSEPLDGRLAVRLEAMKEYKRYLLKLQKNTESNL |
1 | 6nuwG | 0.10 | 0.09 | 3.28 | 0.87 | SPARKS-K | | --TYNSISNFIENELTALLSSDDYLMDD-----------------LAGELPNRLLKAQVIEKRKDAMSRGKQDLLSKEIYDNSELRASQSQQIMELVGDIPKYSLGSELRNRVEGEPQRLIEDVLKLPNDLKVLSEYSNLRKDLILKCQALQIGESKLSDILSQTNSIN |
2 | 6nuwF | 0.13 | 0.10 | 3.49 | 0.62 | FFAS-3D | | ------------TKIKKKLRAKFPDIEYIYSKRQFIQN-----RYSQEL------------QNNERLEAILSREQNLLEETRKLCMNLKTNNKKRLTEKLIQKDVTFRNDSHELNLMLNDPIKSTADVRLDK---------EEVLSLLPSLKEYTKKSKELKETMGQMI |
3 | 6emlr1 | 0.12 | 0.08 | 2.91 | 0.31 | HHpred | | -------------------------------PTPLIHQISDLAKLSKRNVKYDG---YRLTYNGIDYL------ALKTMLNRDTVYSVGN--TIGVGKESDIYK---------VSDKNGNPRVMKIRLGRTYL-KKSQGANWMHLSRLAANKEY-QFMSMLYSKGFK-- |
4 | 3u44A | 0.12 | 0.12 | 4.20 | 0.82 | MUSTER | | AFFELVDRYTTDLDLQFLVKQVYEYSRSHPNPEAWLESFVHLYDVSEKSAIEELPFYQYVKEDIAMVLNGAKEKLLRALELTDNFLDDLAQIDELIQHQDDFSELYKRVPAVSDPALLDEATDLRNGAKKLLEKLKTDYFTRSPEQHLKSLAEMKPVIETLVQLVISYG |
5 | 4c0oA | 0.14 | 0.07 | 2.44 | 0.53 | CNFpred | | -----------------LLQPLVTQMVNVYHVHQHSCFLYLGSILVDEYGME-----EGCRQGLLDMLQALCIPTFQLLEQ-----------------------------------------------------------QNGLQNHPDTVDDLFRLATRFIQRSPVTL |
6 | 2pffB | 0.14 | 0.12 | 4.07 | 0.46 | HHsearch-2 | | VLNLCLTEFENCYDIHALAAKLLQENARIMAKRPFDKKS-NSALFRAQLVAIFGGNTDDYFEELRDLYQTYHVLVGDLIFSAETLSELIRTAEKVFTQGLNI-----------LEW----------LENPSNTPDKDYLLSIPISCPVIQLAHYVVTAKLLGFKAPSGL |
7 | 4ke2A | 0.10 | 0.10 | 3.72 | 0.95 | Neff-PPAS | | AASKAAVTAADAAAAAATIAASAASVAAATAADDAAASIATINAASAAAKSIAAAAAMAAKDTAAAAASAAAAAVASAAKALETINVKAAYAAATTANTAAAAAAATATTAAAAAAAKATIDNAAAAKAAAVATAVSDAAATAATAAAVAAATLEAAAAKAAATAVSAA |
8 | 3lvgE | 0.14 | 0.06 | 2.02 | 0.46 | HHsearch | | -----------------------------------------------------------------------------------------GGGGG--GGGGGGGGGIAQA---DRLTQEPESI--RKEEQRKRLELDAASKVMEQEWREKAKKDNQRQSEQVEKNKINN- |
9 | 2e3xA1 | 0.10 | 0.09 | 3.52 | 0.69 | SP3 | | IVDHSMAKKCNSTATNTKIYEIVNSANEIFNPLNIHVTLIGVEFWCDRDLINVTSSADETLNSFGEWRASDLMTRKALLFTDMRFDLNTLGITQAYRSVGIVQEQGNRNFKTYHDGKNCICNDSSCVMSPVLSDQPSKLFS------NCSIHDYQRYLTRYKPKCIFNP |
10 | 3qc7A | 0.08 | 0.08 | 2.99 | 0.69 | PROSPECTOR2 | | ISIEVEDIKDAGDTGKRLLKI--------NTPSGARNIIIENEDAKALINGETTN------TNKKNLQDLLFSDGNVKAFLQATTTDENKTALQQLLVSNADVLGLLSGNPTSDGAGVPYSLPAATTTTLGGVKKGAAVTASTATDVATAVKDLNSLITVLKNAGIISL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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