Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | KPVPAFKSEAEERKFWETHDSTDYVDWSTAQRMRFPNLKPSTTAISLRLPVSLLEQIKIAANKRDVPYQSLIKMWLAEK |
1 | 1p94A | 0.07 | 0.06 | 2.61 | 1.56 | MUSTER | | --------MSLEKAHTSVKKMTFGENRDLERVVTAPVSSGKIKRVNVNFDEEKHTRFKAACARKGTSITDVVNQLVDNW |
2 | 1p94A | 0.07 | 0.06 | 2.59 | 1.24 | Neff-PPAS | | -------SLEKAHTSVKKMTFGENRDLERVVTAPVSSGKIKR--VNVNFDEEKHTRFKAACARKGTSITDVVNQLVDNW |
3 | 2k29A | 0.22 | 0.10 | 3.20 | 1.05 | HHsearch | | -----------------------------------------MGSINLRIDDELKARSYAALEKMGVTPSEALRLMLEY- |
4 | 1kwmA1 | 0.09 | 0.09 | 3.34 | 0.91 | SPARKS-K | | VFRVNVEDENHINIIRELASTTQ-IDFWKPDSVTQIKPH---STVDFRVKAEDTVTVENVLKQNELQYKVLLRNVVEAQ |
5 | 1p94A | 0.08 | 0.06 | 2.53 | 0.62 | FFAS-3D | | -------------SLEKAHTSVKKMTFGENRDLEAPVSSGKIKRVNVNFDEEKHTRFKAACARKGTSITDVVNQLVDN- |
6 | 5t7zA2 | 0.10 | 0.09 | 3.25 | 0.29 | HHpred | | ------EAHQRSMDYWKRR-VAELP---PPPMLPMKLREIRFRHTEQWLPSDSWSRLKQRVGERGLTPTGVILAAFSE- |
7 | 2k9iA | 0.09 | 0.05 | 1.95 | 1.21 | MUSTER | | ---------------------------------GRPYKLLNGIKLGVYIPQEWHDRLMEIAKEKNLTLSDVCRLAIKEY |
8 | 5u89A | 0.09 | 0.08 | 2.94 | 0.64 | CNFpred | | --------IAKQLDYWKKTLLPEELELPTDYPRP-AESSYEGGIVDFCMDAELHKRLLDLARENKASLFMVLQAGFAAF |
9 | 2k29A | 0.21 | 0.10 | 3.22 | 0.69 | HHsearch-2 | | -----------------------------------------MGSINLRIDDELKARSYAALEKMGVTPSEALRLMLEYI |
10 | 1ea4F | 0.18 | 0.09 | 2.87 | 0.99 | Neff-PPAS | | -----------------------------------------KKRLTITLSESVLENLEKMAREMGLSKSAMISVALENY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|