Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | QKSKLRAREKRRQAREELKDLVGAQATVPEEEESPSSSSPSFQDVPQSSPGTETPRNPKVPGRVRSTTTTTAAAVSNTRFDEGANNQVEERPN |
1 | 5yfpE1 | 0.06 | 0.05 | 2.39 | 1.59 | SPARKS-K | | ---SLYELKKLLKTDNFLGGLTVNEFVQELSKDHRNDVLIDANTKNLPTNEKDQDAIAIWKQLDPKPYIRTFESTLKELKNLNEETLNKR--- |
2 | 4k0mC | 0.09 | 0.09 | 3.32 | 1.10 | MUSTER | | AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
3 | 3j9aA | 0.05 | 0.04 | 2.03 | 1.48 | Neff-PPAS | | -----------SNFKVRDPVIQERLDHDYAHHPLVARMNTLDQGNMSQAEYLVQKRHYLVFLIAHHYYEAYLRRMGGIQRRDHLQTLRDQKP- |
4 | 3bogA | 0.12 | 0.10 | 3.39 | 1.51 | SPARKS-K | | --------------------CKGADGAHGVGCPGTAGAAGS-VGGPGCDGGHGGNGGNGNPGCAGGVGGAGGASGGTGVGGRGGKGGSGTPKG |
5 | 6em3x | 0.12 | 0.12 | 4.15 | 0.36 | FFAS-3D | | --NKLKRQEIFADIKHEKNKERHTMRRKRAKEERENPEKENVTQTIENTRVYEDDLMRYFNSNSNEPPKIFL--TTNVNAKKSAYEFANILPN |
6 | 2z1dB | 0.12 | 0.09 | 3.03 | 0.16 | HHpred | | --SGLELRKEDFEIRSF-YKVEV---PKNLPDLEKGCRCGVLRGLPTDCPLFGKTC-TPRHPVGPCMVS-----------YEGT--------- |
7 | 4nl6A | 0.08 | 0.08 | 3.03 | 1.08 | MUSTER | | LLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWL |
8 | 2z6eA | 0.25 | 0.05 | 1.67 | 0.73 | CNFpred | | MRKKKEEEERRARMEAQLKE------------------------------------------------------------------------- |
9 | 5xtcn | 0.32 | 0.06 | 1.95 | 0.48 | HHsearch-2 | | NKSMLFKRELQP---SEEVTWK----------------------------------------------------------------------- |
10 | 3wp8A1 | 0.08 | 0.08 | 2.97 | 1.28 | Neff-PPAS | | --SKIYHIENEIARIKKLIAVITSNITEVVDGNGNKVNIIDQVVNTKPDNKNQDSLFLTYDKQGQETTDRLTIGQTVQKMNTDGIKFFH---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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