Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | VFKSFDKALNDILKKTYSKNTRKMTVNATASVNVGEKSYIEFPDYGIRVYGETAETPLNRPMTEEDIVSRLSKTGDTPFTFNFVDCNIGENVYIPVSALNSLRRDACSELENKI |
1 | 1kafA | 0.17 | 0.14 | 4.63 | 0.78 | SPARKS-K | | EITSDMEEDKDLMLKLLDKNGFVSNYLAILEKRTNGIRNFEINNNGMRIFGYKM---------MEHHIQKFTDIG--------MSCKIAKNGYLDIKRSAENIEAVITVASEL- |
2 | 4trtA | 0.07 | 0.06 | 2.60 | 0.59 | FFAS-3D | | ------NEGLGLLERVIPSRSSNPLLTALKVETSEGGLTLSGTNLEIDLSCFVPAEVQQPEVPAHLFAQIVRNLGGELVELEELSVRSQADVSLDGGELSRAFSSVRYAASNE- |
3 | 4n58A2 | 0.19 | 0.14 | 4.54 | 0.24 | HHpred | | --VSQIPPIMSLLNG---KNVGRFDIGSDFVRNTAGNITMRTEGDGIRSYNDTANPSTHRGALGEWATGVLNNLSGTPYEIRELKIKENG------------------------ |
4 | 3skxA | 0.14 | 0.13 | 4.52 | 0.64 | MUSTER | | LEARSEHPIAAAIVEEAEKRGFGLTEVEEFRAIPGK--GVEGIVNGRRYMVVSPGYIRELGIKTDESVEKLKQQGKTVVFILKNGEVS--GVIALADRIRPESREAISKLKAIG |
5 | 2epkX | 0.08 | 0.07 | 2.75 | 0.64 | CNFpred | | -------KALVRLDKYL----NLGEIAVSLVTDSATSIKVEGRQGYYQVSYKQPHQLY----RALALLSAALRSGQD-YEDLAYMADCSRNAVLNLSSAKKMIEVLALMGYSTF |
6 | 2dr5A2 | 0.16 | 0.14 | 4.66 | 0.35 | HHsearch-2 | | LERASRKI-FEFLER-----ENFMPLRSAFKASE-EFCYLLFECQRVRRMG--------PQFEERNVKKFLSRNRARPFIENRWWAFEMRKFTTPEEGVRSYASTVGESIREYF |
7 | 3cvzA1 | 0.17 | 0.14 | 4.61 | 0.61 | Neff-PPAS | | -YTVVKNDWKKAVKQLQDGLKDNSIGKITVSFNDGVVGEVAPKSAN-----KKADRDAAAEKLYNLVNTQLDKLGDGDYVDFSVDYNLEKSGTINVRVIN-------------- |
8 | 3domD | 0.10 | 0.05 | 1.95 | 0.35 | HHsearch | | -----------------------------ARAR-----------KGALVQ---CDPS------IKALILQIDAK-MSDIVLEELD---DTHLLVNPSKVEFVKHELNRLLSKN- |
9 | 2yheA2 | 0.05 | 0.04 | 1.98 | 0.75 | SP3 | | ----TPDMFFDLLAIRLDTDKVGHDMTLNWVFELKQDIALTLRNGVLTQRVGSLNP---KALTKPTLDQIAA--RKLDIKQGTVKLDGD--------------GKKLGEFFGLL |
10 | 5cw9A | 0.14 | 0.13 | 4.52 | 0.51 | PROSPECTOR2 | | MFRGDDYKALREMIRQARKFAGTVTVTLIIRFRGDDAGTVTYTLDGNDLEIRITGVPPQVILELVKEAIRLAKEFNITVTV-ELVIRITG---VPEQVRKELAKEAERLAKERL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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