Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | IQEISSSLSDEEKRKEEKMLQIIKEYGESLCTKEKQEEIIKAQEIVCDACTYIWRRPEDRASFLIEAYSRYLHSKTVEVSKHGDIDEPLFDYVDHCSLVSTYEKYKSMDIVGELFLRVFLEGKDINDESVNDAVCGV |
1 | 5cwjA | 0.12 | 0.10 | 3.64 | 0.86 | SPARKS-K | | -------DSEEEQERIRRILKEARKSGTEESLRQAIEDVAQLAKEAIRVILRIAKESEEALRQAIRAVAEIAKE----------AQDSEVLEEAIRVILRIAKESGSEEALRQAIRAVAEIAKEADPRVLEEAIRVI |
2 | 6c0fF1 | 0.12 | 0.11 | 3.83 | 0.88 | FFAS-3D | | ---TPESQLKKSKAQQKTAEQVAAERAARKAANKEKRAIILERNAAYQ--------KEYETAERNIIQAKRDAKAAGSYYVFGKINKQRVPLSDNAIIEANLGKY-GILSIDDLIHEIITVGPHF--KQANNFL--- |
3 | 3e4bC4 | 0.13 | 0.04 | 1.51 | 0.27 | HHpred | | --------------------------------------------------------------------------------------------ICYVELATVYQKKQQPEQQAELLKQMEAGVGTVTAQRVDSVARVL |
4 | 5cwfA | 0.20 | 0.18 | 5.61 | 0.62 | MUSTER | | -------MS-DEMKKVMEALKKAVELAKKNNDDEVAREIERAAKEIVEALRE--NSDEMAKVMLALAKAVLLAAKNNDDEVAREIARA------AAEIVEALRENNSAKVMLALAKAVLLAAKNNDDEVAREIARAA |
5 | 5cwfA | 0.16 | 0.13 | 4.36 | 0.67 | CNFpred | | ------------------ALAKAVLLAAKNNDDEVAREIARAAAEIVEALREN--NSDEMAKVMLALAKAVLLAAKN-----NDDEVAREIARAAAEIVEALRENNSDEMALELAKRVLDAAKNNDDETAREIARQA |
6 | 1vt4I3 | 0.15 | 0.13 | 4.42 | 0.42 | HHsearch-2 | | EYALHRSIVD---------HYNIPKTFDSDDLIPPY----LDQYFYSHIGHHLKEHPERMLFRMVFLDFRFL-EQKIRH--DSTAWNASGSILNTLQQLKFYKPYI-CDNDPKYERLVFLPKIEENLKYFEEAHKQV |
7 | 5h7cA2 | 0.14 | 0.12 | 4.26 | 0.72 | Neff-PPAS | | VIEIVKELAELAKQDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQS--TDSELVNEIVKQLAEVAKEA----------TDKELVIYIVKILAELAKQSTDSELVNEIVKQLEEVAKEADKELVEHIEKIL |
8 | 3e4bC4 | 0.13 | 0.04 | 1.51 | 0.38 | HHsearch | | -------------------------------------------------------------------------------------------DICYVELATVYQKKQQPEQQAELLKQMEAGVGTVTAQRVDSVARV- |
9 | 5b7xA | 0.10 | 0.09 | 3.50 | 0.69 | SP3 | | -MSMEIEAPNANTQKIRDCFNFYDRDYDGKIDVKQLGTLIRSLGCA--------PTEDEVNSYIKEFIEQFELIMEREQSKPDTREIKLRKKIKASDLAHNLTTVGTKEEVEKVFSILGITMESIDLATFLKLVALH |
10 | 5cwmA1 | 0.15 | 0.12 | 4.16 | 0.62 | PROSPECTOR2 | | -------DPEDELKRVEKLVKEAEELLRQAGSEEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRV------------------AELLLRIAKESGSEEAL-ERALRVAEEAARLAKRVLELAEKQG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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