Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | TLSPDELNFNGVPVGSSRTIPVTALNTGTAALEISAITIEGADFALGAVVAPVTLQPNDTLTFDVIYQPSSPGEASGVVRV |
1 | 6bqmA2 | 0.14 | 0.14 | 4.65 | 1.65 | SPARKS-K | | LSYRQKRDLGVVRPG-SYTHNLTFTNNGNADINLGNTFVFVVAAAIVNNSCTGVLASGASCDVEFSYNITEHKQSYVKLII |
2 | 2qsvA2 | 0.09 | 0.09 | 3.30 | 1.31 | FFAS-3D | | GVELSTYLDGQLD-GETTKAAIEIRNVGAGPLRLHSVTTRNPALTAVPDRT--EIKPGGSTLLRIAVDPQVKQSIAADISI |
3 | 2qsvA2 | 0.12 | 0.11 | 3.94 | 1.02 | HHpred | | ELS-TYLD-GQLDGETTK-AAIEIRNVGAGPLRLHSVTTRNPALTAV--PDRTEIKPGGSTLLRIAVDPQVKQSIAADISI |
4 | 2e6jA | 0.12 | 0.12 | 4.33 | 1.70 | MUSTER | | HFNFELLDIGKVFTGSAHCYEAILYNKGSIDALFNMTPPTSALGCFVFSPKEGIIEPSGVQAIQISFSSIILGNFEEEFLV |
5 | 2qsvA | 0.10 | 0.09 | 3.23 | 1.36 | CNFpred | | -----YLDMGQLDG-ETTKAAIEIRNVGAGPLRLHSVTTRNPALTAVPD--RTEIKPGGSTLLRIAVDPQVMQSIAADISI |
6 | 6bqmA2 | 0.14 | 0.14 | 4.64 | 1.34 | HHsearch-2 | | SYRQ-KRDLGVVRPGS-YTHNLTFTNNGNADINLGNTFVFVVAAAIVNNSCTGVLASGASCDVEFSYNITEHKQSYVKLII |
7 | 2e6jA | 0.12 | 0.12 | 4.33 | 1.84 | Neff-PPAS | | HFNFELLDIGKVFTGSAHCYEAILYNKGSIDALFNMTPPTSALGCFVFSPKEGIIEPSGVQAIQISFSSIILGNFEEEFLV |
8 | 6bqmA2 | 0.14 | 0.14 | 4.63 | 1.96 | HHsearch | | SYRQ-KRDLGVVRPGS-YTHNLTFTNNGNADINLGNTFVFVVAAAIVNNSCTGVLASGASCDVEFSYNITEHKQSYVKLI- |
9 | 2e6jA | 0.14 | 0.14 | 4.67 | 0.82 | PROSPECTOR2 | | HFNFELLDIGKVFTGSAHCYEAILYNKGSIDALFNMTPPTSALGAFVFSPKEGIIEPSGVQAIQISFSSIILGNFEEEFLV |
10 | 6bqmA2 | 0.16 | 0.15 | 4.95 | 0.85 | SAM | | -YRQ-KRDLGVVRPGS-YTHNLTFTNNGNADINLGNTFVFVA-AAIVNNSCTGVLASGASCDVEFSYNITEHKQSYVKLII |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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