Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | QVQIPLSVLCDNLTLRCVHTLFDHLSEEAKSYEQVIDGVVNINGGIMDIDDCLVNEWLMQLNLVDKIISALEQRLTEYEQYTAEVAQKEAAARLVEKRANKSRSPKDAKSKRSEQRLSKRILREPEMIPEGMFPDPLQRFIEQEQQEFDDFLNQFLNPQNLKLAPDEINLRQYNILGGLYSMHFVRKPMHKEFEKFNITLHEDGRILYTQQDVRADVGSRRSTRLKSRFNYTQAMESPENRHLKLAPDEVSYFCVTFRLPKMLCLFGEPVVC |
1 | 4uosA | 0.09 | 0.06 | 2.25 | 0.81 | SPARKS-K | | -------------------------------------------GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENLKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVD--NEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVG---------------------------------------------- |
2 | 5voxH | 0.06 | 0.02 | 0.96 | 0.81 | FFAS-3D | | ------------------------------------------------IATLLQAEKEAHEIVSKARKYRQDKLKQAKTDAAKEIDSYKIQKDKELKEFEQKNAGGVGELEKKAEAG-----------VQGELAEIKKIAEKKKDDVVKILIETVIK------------------------------------------------------------------------------------------------------------------- |
3 | 2pffB | 0.14 | 0.12 | 4.13 | 0.44 | HHpred | | --TDDYF----E-ELRDLYQTYHTLSELEKVFTQGLLPSNPDKDYLLSIPISCPLIGVIQLAHYVV-TAKLLGELRSYLKTAVAIAETDSWESFFVSV---RKAITVVRCYEAYPNTSLNEGVPSPMLSISNLT-------QEQVQDYVNKTNSH-LPAGKQVEISLVNGAKNLVVSGPYGLNLLRKKAPSGLDQSRIPF--SERKLKFSNRFLPVASPFHSHLPASDL------I-----NKDLVKNNVSFNAKDIQIPVYDTF------- |
4 | 4ykeA1 | 0.09 | 0.08 | 2.97 | 0.75 | MUSTER | | ----TAGPD----TIRILVS--DHVG-------YEERDPIRKDDSWRTFDEIMQLARTKDVDM---LFHDNKPSRKAMYQVMRSLRKNCLGMKPCELEFLSDPAEVFEGAFPHVNYYDPDINVSIPDPSGDGHLCSLDLLQVAG---LVNYFGRVPEADNIHVKPILLQKGKTKLA--LYGMSNVRDERIHRFRDNKVRFYRPTGDWFN-AHTPTGYLSENMLPDFLECLIDPKKNPETGFHVPGEAVPKHIAILSIT-GKSFEV--RTV-- |
5 | 5ofbA | 0.08 | 0.04 | 1.61 | 0.57 | CNFpred | | ---------------------------------------------------RFKTRAEQEVKKAEHVARIAEEKAREAESKARTLEVRLGG----------------------------------------DLTRDSRVMLRQVQNRAITLRREADVKKRIKE-AKQRALKEPKELNFVFGVNIEH------RDLDGMFIYNCSRLIKMYEKVGPQLEGGMA---------------------------CGGVVGVVDVPYLVLE------- |
6 | 2pffB | 0.14 | 0.12 | 4.27 | 0.86 | HHsearch-2 | | NATDDYFE-----ELRDLYQTYHTLSELEKVFTQGLLESNTPKDYLLSIPISCPLIGVIQLAHYVV-TAKLLGELRSYLKTAVAIAETDSWESFFVSVR-K-AITIGVRCYEAYPNTSNNEGVPSPMLSISNLT-------QEQVQDYVNKTNSH-LPAGKQVEISLVNGAKNLVVSGPYGLNLRKAKAPSGLDQSRIPF--SERKLKFSNRFLPVASPFHSHLPASD------L-----INKDLVKNNVSFNAKDIQIPVYDTFIRLPVKW |
7 | 2tmaA | 0.08 | 0.08 | 3.01 | 1.18 | Neff-PPAS | | --MLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAED-ADRKYEEVARKLVIIESDLER----------------AEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYA |
8 | 3lvgE | 0.07 | 0.03 | 1.06 | 0.46 | HHsearch | | -------------GGGGGGGGGGGGGGIAQADRL-TQEP------------ESIRKWREEQRKREKAKKDLEEWNQRQSEQVEKNKIN-------N-R-------------IAGGGGGGGGGG---GGGGGGG-GGGGGGGGGGGGG--G----G-G--G---------------------------------------------------------------------------------------------------------------- |
9 | 6etxG | 0.04 | 0.04 | 1.94 | 0.68 | SP3 | | ETWSPFHISLKPYHISKFIYRHGQIRVFNHSRDRWLRVLSPFAPDYIQRSLFHRKGINEESCFSFLRFIDISPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSWGAPEGESHQRYLRNKDFLLGVNFPLS--------FPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQF-------FPEPAGGLWSIRPQ |
10 | 4n9nA | 0.07 | 0.06 | 2.64 | 0.93 | PROSPECTOR2 | | NLNLIPTITAAKVSGPEIWFDYPRTETGLESLANASVDNIFELRIKSPSLNAAKSELDKAKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINVFQGETGVAGFTNSLRLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYVDSSPSAWIFHVK-----GAATILTAVWPLSER---------SKFHNIISVDLSDLGDVINPDVGTITELVCFDESIADLDKLHREKNQGDFILRVFALLDKTLEGVTQVLPQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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