Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | LPPAQQALESSYKTHLKEHYDIDFNRLYTITNMPIKRFGSTLISKGSFDDYMQLLVDSYNPDTLEQVMCINTISVDWQGYLYDCDFNQMLDLPLADNQGKMHIADLVATDLQSDKIATRQHCYGCTAGQGSSCGGA |
1 | 4m7sA | 0.13 | 0.12 | 4.34 | 0.74 | SPARKS-K | | VTGEDPALYKTL-EQLSSL-DFAGRISFHFYGEPLLCLDLFVGTTEYIEKRLQTLTELGIQKKANSCVPSNLAVVTVLGNVLPCFEDFNQKVGNIGEQH---ISDIWHNKLKEGHRGKSDLCKNCNNVSVQTEEQY |
2 | 3h10A2 | 0.13 | 0.09 | 3.07 | 0.55 | FFAS-3D | | ---EKAGVEHQLRREVEIQSHLRHPNILILEYAPLGTVYRELQKLSKFATYITELANALSYCHSKRVIHRDILLLGSAGELKIADFGWSVHAPSSRR--------------------------------------- |
3 | 6c8vA | 0.08 | 0.07 | 2.93 | 0.38 | HHpred | | HRGNIHEVPG-FIDLAV-KLGAKRLEVAHT--QYYGWAYVALPDKSQVIRIVEAARERLKGQAKYPKACRKLMNVTPQGKVLPCHAAETIPGLE-FWYTDHALGEIWTAAYR-GTSWMKEPCRSCDR--REKDWGG |
4 | 6efnA2 | 0.16 | 0.14 | 4.66 | 0.74 | MUSTER | | INESNADEVSDVVEQCANA----AFIFRAGKTLSVGRATFKALDIDFEEMVQIQLREARHGDRLNIIFCYLAWYIRADGYVTPCQL---EDLPL----LEDSMADISPARL--LQLKEAKNC--CIGKIELSEPDL |
5 | 1xpkA | 0.15 | 0.12 | 3.98 | 0.56 | CNFpred | | --DAYIRSFQQSWNEYAKRQGKSLDFASLCFHVPFTKMGKKALESIADETTQERLRSGYEDAVD---------YNRYVGNIYTGSLYLSL------------ISLLENRDLQGETIG----LFSYGSGSVGEFYSA |
6 | 6efnA2 | 0.13 | 0.12 | 4.09 | 0.60 | HHsearch-2 | | NESNADEVSDVVE-QCA-NAGAFI--FRAGKTLSVGRATEG-FKALDIDFEEIQLREARHKWRLETDFCTLAWYIRADGYVTPCQLED---LP--LGHLEDSMADIGSPARL-LQLKEAKNC-KCIGKIELSEPDL |
7 | 5yvmA1 | 0.13 | 0.12 | 4.32 | 0.68 | Neff-PPAS | | LPSSDIIFGSGTLEKIGEETKKWGDKAILVTGGFLADAIDYLESAGTTTVVDEGAEIVLEEG------CDVVVALGG-GSSMDAAKGIAMVAGHSAEERDISVWDFAPEGKETKPITEKTLPVIATSGTGSHVTPY |
8 | 4m7sA2 | 0.20 | 0.10 | 3.07 | 0.58 | HHsearch | | ---------------------------------------------------------------ASKANSSNLAVVTVLGNVLPCFEDFNQK----VGNGEQHISDIWFTSFRKLKEGKSDLCKNCNN--VSVQTE- |
9 | 6cp0A2 | 0.08 | 0.06 | 2.30 | 0.76 | SP3 | | -----KSLKDKIVDSVLVQLD-----------------KDFNTKDGDRGQKFEDIKKLV-LEEYKKIDSELQVDEDTYHQPLNLDYLENIACTLDDNSTAKDWVYGIIGATTEADYWPKK---------------- |
10 | 3wiwA2 | 0.08 | 0.08 | 3.16 | 0.51 | PROSPECTOR2 | | LDTIRVTGDKIYLKPLENGAFGHWQFPVIIDNLMNLEYLYWAGKEFNKPEWFDAAKTHA--VTTMKNHFRKDYSS-YHVISYDTLSGKVLQRETHQGLTNESAEHIAAFIMNHPAMPADKIPLWDFDVHNRDRSPR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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