Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | ASSVLASTAAVASAAINRSAPRSSTVAPFTGLKSNSAFPVTRKPNKD |
1 | 5a1uE3 | 0.15 | 0.15 | 5.02 | 1.29 | SPARKS-K | | HEMVVYEAASAIVNLPGCSAKELAPAVSVLQLFCSSPKAALRYAAVR |
2 | 1mztA | 0.26 | 0.21 | 6.55 | 1.41 | MUSTER | | AKAAFDSLQASATEYIGYAAMVVVIVGATIGIKLFKKF--------- |
3 | 1mztA | 0.26 | 0.21 | 6.55 | 1.25 | Neff-PPAS | | AKAAFDSLQASATEYIGYAAMVVVIVGATIGIKLFKKF--------- |
4 | 5a1uE6 | 0.09 | 0.09 | 3.30 | 1.00 | SPARKS-K | | HEEVRAGAVSALAKFGAQVLLKRCVMDDDNEVRDRATFYLNVLEQKQ |
5 | 5x8pm2 | 0.14 | 0.13 | 4.34 | 0.26 | FFAS-3D | | ---VIILRKEKRFNRVAIE--RLKEIRCYRGIRHKLGLPVRGQRTKN |
6 | 6f36N | 0.24 | 0.17 | 5.32 | 0.23 | HHpred | | --SLIPFRAVY---FAFRGMA-PATASTLNGLKTFSSISL------- |
7 | 2klvA | 0.16 | 0.15 | 4.96 | 1.18 | MUSTER | | VIDTSAVESAITDGQGDMKAIGGYIVGALVILAVAGLYSMLRKA--- |
8 | 3tmaA | 0.25 | 0.17 | 5.28 | 0.55 | CNFpred | | LRGSLTPVLAQALLRLADARPGMRVLDPFTGS--------------- |
9 | 2psbA | 0.38 | 0.19 | 5.68 | 0.42 | HHsearch-2 | | -----------------------KLKAPLTGLKTEQRRPVAVVVNNH |
10 | 3vqjA1 | 0.20 | 0.17 | 5.45 | 1.15 | Neff-PPAS | | -------TDDLLRAGLEGDAAAEKLIGQATGRAFVSAGKASASPAAF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|