Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | SEYLLCALWCVVSLYLTYSILDSLMVRWIVKYSTLAAILRMFAMSLLIITTELLLLASLSPNGDYYLHTWILVSCIMTAAYIWQSYLTSNLNYVSQDDYDASEEEADCNTRKELNSTDIEELTSSNVSLNSLPSSCSLQKRKNKRRPQKRFKFTKKRTIDLYNIIVFCVVPVGLASFITMVGLLRN |
1 | 3o7pA1 | 0.07 | 0.06 | 2.67 | 1.04 | SPARKS-K | | IIPFALLCSLFFLWAVANNLNDILLPQFQSAFYFGYFAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLG-----PESSGHFRLNLAQTSFGAIIAVVFGQSL-----ILSNVPHQSQDVLDKMSPEQLSAYLSVQTPYMIIVAIVLLVALLIMLTKFPA---- |
2 | 4ryiA | 0.16 | 0.07 | 2.33 | 0.64 | FFAS-3D | | PGMTIGMIWAVLSVAILFLLNYIFNQAFSFQFSQKNLFLATVDCLLVAITTLLLIMFSSNLSKVSPYFLWSAFATYLSWTIYS------------------------------------------------------------------------------------------------------- |
3 | 3t9nA | 0.10 | 0.09 | 3.16 | 0.23 | HHpred | | VKFLLDVLKILIIAFIGIKFADFLIYRFYKLYRKIDTLTSLTKRYIIYFLAGASILKLFNID-MTSLLAVAIGSIGFGAQNLVKDMISGFFIIFEQFSVGDYVTI--NGISGTVEGLRVTIRGFSDGLHIIPNGEIK--MVTNL-------T-KDSMMA-----VVNIAFPID------------- |
4 | 6ftg51 | 0.08 | 0.08 | 3.01 | 0.89 | MUSTER | | NE-GIAIFCMLLTYYMWIKAVKTGSIYWAAK---YMVSSWGYVFLINLIPLHVLVLMLTGRFSHRIYVAYCTVYCLGTILSMQISFVGFQPVLSSEHMAAFGVFGLCQIHAVDYLRSKLNPQQFEVLFRSVISLVGFVLLTVGALLMLIIASVSEHQPTTWSSYY-FDLQLLVFMFPVGLYYCFSN |
5 | 3rkoC | 0.07 | 0.05 | 1.95 | 0.97 | CNFpred | | PDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQ------------------------------------------------------------------LAYQGAVIQMIAHGLSAAGLFILCGQLYE |
6 | 3jacA | 0.11 | 0.11 | 4.04 | 0.77 | HHsearch-2 | | LWYFVKCIYFALSAYQTRILGNFLTKKYNHLFQGFRLVPFLVELAVMDWVWTDTTLSLSNWEKKKKIVKY-GMGGLIILFLIAIIWFLIRSVVVNQPID-VTVTLKLPFTPQAYSPEDIVTAQIEGSSGALRISPPSRAQMKQELYNTLRFTWNFQRDLAKGEYTEKHELAPNSTARRQLAQLLEG |
7 | 3o7pA1 | 0.08 | 0.08 | 2.99 | 0.92 | Neff-PPAS | | IIPFALLCSLFFLWAVANNLNDILLPQFQQAFKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVL-----GPESSGHFRLNLAQTFASFGAIIAVVFGQSLILSNVP---HQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFP |
8 | 3frqA2 | 0.14 | 0.04 | 1.46 | 0.30 | HHsearch | | VEGIRPGA-PAAAELLLHSVIAGATMQWAVDPDGEADVLAQI---------AAILCLMFPHDDFQL------------------------------------------------------------------------------------------------------------------------ |
9 | 6me6A | 0.09 | 0.09 | 3.32 | 0.70 | SP3 | | SVIGSVWNITAIAIDRYLYICHSMAYHRIYRRWHTPLHICLIWLLTVVALLPNFFVGSLEIQTASTQYTAAVVVIHFLLPIAVVSFCYLRIWVLVLQARMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFEEVECLKPSDLRVFVIFAICFAPLNCIGLAVAINPQEM |
10 | 4e40A | 0.07 | 0.07 | 2.89 | 0.71 | PROSPECTOR2 | | DSDDVAAACELRAQLAGVSIASGILLRNATTEFSRKKSEDILAKGGAAVERASAAVDRVSGLDKTNETAQKVVEIVAKKVNEIIELTAGATEHAKGAKANGDASAVKVSNARAKESENQYVKEAAEECSESTNYDVTAKSLAAALDKLPGVKEDNAVKTTFQSILTSLDLDKDVKSVEQRAEELEV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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