Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | EWKDWLKKLEREWKIFYKKLENEKNAFMEEKEEDWNTWMESIQKKWSHFNPNMDKEFHTNMIKNSMNWTEPQWREWIQTSGRVYLDIEWKKWFFEKQSHLDELIVKKWIQWKKDKIIDWLMCDWKREEQEQWEGFEDQPWSSKIFQIFKKKKYEAFKERTEDEWDDWFEWVKRKDNIFITNILNEWIQWKDEKNILYNQWVETFITNWMNQKN |
1 | 4uosA | 0.07 | 0.06 | 2.36 | 1.14 | SPARKS-K | | ---GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENGED-------------------SEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGNE--EVKKMLEKMIEEIKKMLEKKKVKEMLEKMIKEIKKMLEEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVG---------- |
2 | 2j69A1 | 0.09 | 0.09 | 3.36 | 1.16 | FFAS-3D | | ELKKRIDSVEPEFNKLTGIRDEFQKEIINTRDTQARTISESFRSYVLNLGNTFENDFLRNLFDFLSSGKREAFNAALQKAFEQYITDKSAAWTLTAEKDINAAF-KELSRSASQYGASYNQITDQITEKLTWAKWAMGLLSAGFDWKNILLNYQARRELVKTAKKELVKHLPQVAH-------EQSQVVYNAVKECFDSYEREVSKRINDD-- |
3 | 4tqlA | 0.13 | 0.13 | 4.54 | 1.08 | MUSTER | | QMVQELEKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKDEAKKKIEQMIQQIKQGGDKQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKELLEKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQ--VKRAKQLIEKAKQVAEELIKKILQLIEKAKE |
4 | 1vt4I3 | 0.10 | 0.07 | 2.44 | 1.56 | HHsearch-2 | | -----------------------------------------------EYAL--HRSIVDHYNPKTFDSDDL-----IPPYLDQYFYSHIGHHLKNEHPERMTLFRMVFLDFR--FLEQKIRHDSTA-----------WNASGSILNTLQQLKFYKP--YICDNDPKYERLVDFLPKIEENLICSKYTD---LLRIALMAEDEAIFEEAHKQVQ |
5 | 5cwmA | 0.13 | 0.13 | 4.42 | 1.22 | Neff-PPAS | | DPEDELKRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESGRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQERVKELRE |
6 | 4tqlA | 0.10 | 0.09 | 3.52 | 1.02 | PROSPECTOR2 | | ELEKARDRMEKLYKEMVELIQELMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQ----QIKQGGDKQKMEELLKKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQKKMKEKMEKLLKEMKQRMEEVKKKMDDELLEKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKAKQVAEELIKKILQLIAKEIAEKKG |
7 | 6irdB | 0.10 | 0.09 | 3.52 | 1.15 | FFAS-3D | | -YLAHLAAQQAELNSLKAAHAAEHSTMQKLHCTQVDKIVAQYDKEKSTHEKILEKAMKKSKVKEIVAQHTKEWSEMINTHSAEEQEIR-DLHLSQQCELLRKLLTQQLKLSHDRESKEMRAHQAKISMENSKAISQDKSIKNKAERERRVRELNSNTKKFLEERKRLAMKQSKEMDQLKKVQLEHLEFLEKQNEQAKEMQQMVKLEAEMDRR- |
8 | 5cwmA | 0.12 | 0.12 | 4.29 | 1.03 | MUSTER | | DPEDELKRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVEL-VVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRELVVRVAELLLRIAKESGSEEEEAARLAKRVLELAEKQPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQERVKELRE |
9 | 5cwqA | 0.08 | 0.08 | 3.28 | 1.14 | Neff-PPAS | | ELERESEEAERRLQEARKRSEEARERGLKELAEALIEEARAVQELARVACERGNSEEAERASEKAQRVGDDEVLALALIAIALAVLALAEVACCRGNSEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRNKEEAERAYEDARRVEEEARKVKESAEEQGDSEVKRLAEEAEQLAREARRHVQECRGGWLE |
10 | 5nl6A | 0.09 | 0.08 | 3.09 | 1.13 | FFAS-3D | | NFLDFLRATEGMVHDYEQRAQ-ALKENIEAAINKMNGVVKEQINETKNYRKGDKRAFIKEQGD------LATLFGQINSKLRKSLEGYIAN-ISEAERALRSKLNTAMRNCLIALRKAFADPAKINEYRTFVTDETSEAPLEE--QVATLKAKLEELKQVEAQLPPIEEAEKACEDAYTDVSFDDLQFNYEQTVSMFEKKIVYIEAQINE--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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