Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | NMANLSLHDHDGSSGASDQDTLAPLPHPGAAPWPMAFPYQYPLPHPYNPHPGFPDPGYSYGGGSAGSQHSEGSRSSGSNRSGSERRKERDPKTGESKSGGSGSESDHTTRSSMRRERAASERSVPASQHSQRSQHSLAHSLRSHHSQQSYGPPGLPPLYSPPMLLMPPPPSAMGPPGAPPGRDLASVPPELTASRQSFRMAMG |
1 | 4nl6A | 0.11 | 0.11 | 3.91 | 1.39 | SPARKS-K | | VASFKHALKNGDICETSGKPKTASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPP--PPPPPHLLSCWLPPFPSGPPIIPPPP-PICPDSLDDADALGSMLISWY |
2 | 4nl6A | 0.15 | 0.14 | 4.82 | 1.25 | MUSTER | | ASFKHALNGDICETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKRET-TGSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGPPIIPPPPPICPDSLDDA-------DALG |
3 | 4k0mC | 0.10 | 0.08 | 3.12 | 2.14 | Neff-PPAS | | --ETVEVHAKLGIDPRSDQNVRGTVSLPHG----LGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----------------------- |
4 | 4k0mC | 0.06 | 0.06 | 2.51 | 1.56 | PROSPECTOR2 | | KVYTIRTAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-----------------AAA |
5 | 4k0mC | 0.11 | 0.09 | 3.36 | 1.36 | SPARKS-K | | FDETVEVHAKLGISDQNVRGTV-SLPHGGKQVRVLAI-------AKGEKIKEAEEAGADYVGGIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA--AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----AAAAAAAAAAAAAAAAAAAAAAAAAAAA------------------- |
6 | 2xd8A | 0.11 | 0.10 | 3.59 | 0.51 | FFAS-3D | | -MANANQNLSTGTGYGGATDKYALYLKLFSGEMFKGFQHETIARDLVTKRTLKNGKSLQFIGRMTSSFHTPGTPILGNADKAPPVAEKTIVMDDLLISSAFVYDLDETLAHYELRGEISKKIGYALAEKYDRLIFRSITRGARSASPVSATNFVEP---------GGTQIRVGSGTNESDAFTASALVNAFYDAAAAM----- |
7 | 6bx0A | 0.16 | 0.06 | 1.96 | 0.31 | HHpred | | --ALLQV-AQDNSADNFYIDSVGYVPW---RASKLPT-YCYHVDWNTNIQFTPEMIKYIFNAK---PASL--AYHWQSQRHIGSC---------------------------------------------------------------------------------------------------------------------- |
8 | 2nbiA | 0.16 | 0.16 | 5.26 | 1.20 | MUSTER | | NPSSQPSECADVLEECPIDECFLPYSDASRPPSSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQIEQCPPYGDSSRPCTDPAVN |
9 | 3r45C | 0.29 | 0.03 | 0.90 | 0.44 | HHsearch-2 | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EDDQLLQKLRASRRRFQRRMQ |
10 | 4nl6A | 0.10 | 0.10 | 3.60 | 1.92 | Neff-PPAS | | -FKHALKNGDICETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGPPIIPPPPPICPDSLDDAD-----------ALG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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