Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | MKTGLTLILIGHINFILGAIVHGSVLRHISKPSQHISTEYTVANIISVTSGLLSIATGIIAIVVSRNIHVLKLQIGLLIASFLNALLSAACCTGLLMAISVTVAHSGQGLMQGCNDTEVPINARSPVSAQCPFDTTRIYDTTLALWFPCAVLSAVEVALSVWCFIVGLALRGLAPCGKSYIKEQ |
1 | 3gi9C | 0.16 | 0.16 | 5.23 | 0.90 | SPARKS-K | | AVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPFLFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFK----STEGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVILSHYILIDEV |
2 | 6d26A1 | 0.20 | 0.14 | 4.53 | 0.78 | FFAS-3D | | ------AVLLHGLASLLGLVENGVILFVVGCRMRQTVVTTWVLHLA--LSDLLASASLPFFTYFLAVGHSWELGTTFCKLHSSIFFLNMFASGFLLSAISLQVVR--------------------PVWAQNHRTVAAAHKVCLVLWALAVLNTVPYFVF------------------------- |
3 | 1z45A | 0.22 | 0.11 | 3.42 | 0.40 | HHpred | | ------------------SVIHFAGLKAVGEST-QIPLRYYHNNILGTVV-LL------------ELMQQYNVSKFVFSSSAT-------------------V-Y-G----DATRFPNM-----IPIPEECPLGPTNPYGHTKY---------AIENILND----------------------- |
4 | 4a2nB | 0.09 | 0.09 | 3.27 | 0.84 | MUSTER | | M-NENLWKICFIVMFIIWVFVRKVYGTRAMKNKSKKKVRPNFEKSLVFLNFIGMVFLPLTAVFS------SYLDSFNINLPDSIRLFALIVTFLNIGLFTKIHKDLGNN-----WSAILEIKDGHKLVKEGIYKNIRMYAHLWLWVITQGIILWVVLIFGIVAWAILYFIR---PKEEELLIEE |
5 | 3rkoB | 0.08 | 0.06 | 2.33 | 0.93 | CNFpred | | ------MLMWATLMLLGGAVGKSAQLPLQTWLAD----MAGPTPVSALIHAATMVTAGVYLIARTHGLFTPEVLHLVGIVGAVTLLLAGFAALVLAYSTMSQIG-------------------------------YMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILA----------- |
6 | 6qkcI | 0.16 | 0.11 | 3.61 | 0.53 | HHsearch-2 | | THSGLWRICCLEGL-------KRGVCVKINHFAEYLLRVVRASSILSAILLLLGGVCVAA----SRVYKSRNII-------LGAGILFVAAGLSNIIGVIYISANAG--------------------KNHYS------YGWSFYFGGLSFILAEVIGVLAVN---IYI---------ERSR--- |
7 | 4a2nB | 0.08 | 0.08 | 2.98 | 0.82 | Neff-PPAS | | --NENLWKICFIVMFIIWVFVRKVYGTRAMKNKSKKKVRPNFEKSLVFLNFIGMVFLPLTAVFS------SYLDSFNINLPDSIRLFALIVTFLNIGLFTKIHKDLGNNWSAILEIKD-----GHKLVKEGIYKNIRMYAHLWLWVITQGIILSNWVVLIFGIVAWAILYFIRVPKEEELLIEE |
8 | 2vy4A | 0.25 | 0.05 | 1.52 | 0.38 | HHsearch | | ---------------------------------------------------------------------------------------------------------------------------GSDEVVICPYDSNHMPKSSLAKHMA-------------SCRLRKM---GY-------TK-- |
9 | 6idpA | 0.07 | 0.07 | 2.68 | 0.70 | SP3 | | GGLVIVIGIGVALIALVLYLLRQPLLGLLGAPETVFAIIDHYWLWWLASAWTGAMLYFYYSVCRANGNTLLPG-TLMMVTSVLNLILDPIFIFIDGAAIATIIAFGVGIAIVAPKVAQRQWTSYQWQDLN----ISQSLTALGHIMGPAMLSQLLPPLSSMFATKLLASF----------GTAA |
10 | 4e40A | 0.12 | 0.12 | 4.38 | 0.69 | PROSPECTOR2 | | GEIKVELAQLAGVSIASGILLRPAAVDRVSGLDKTNETAQKVRKAAAVAHHALEHVKEEVEIVAKKVNEIIELTAGATEHAKGAKANGDASAVKVSNLLARAKESENQYVAEECSESTNYDVTKLPGVKEDNAVKTTFQSILTSLDNLDKDVKSVEQRAEELETALEKAERQLEKAEKTESSKV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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