Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | KMDDQKVKDTFKNLYKVNALIKNNPMIRPDLFDATIVSGFSTKNDEEKFNAIFDSIKGMYYRAQHMDKYLKSLRWNTDIVEEDREKAVEYFKKHVYTGEHVVDVNGMAGVCKEFLSPASDFYKLVESFDAFAHAKVHAQVGNFVKPGTDIAPPKDVTDALEKELQEQKPARSESTEVPAPGDASGVQQPPASGTSPQGPAPTTPSPSPESSGNLQGQQGTTKPAGSSFTYGGLTVA |
1 | 5cwjA | 0.09 | 0.06 | 2.24 | 0.67 | SPARKS-K | | -----DSEEEQERIRRILKEARKSG--TEESLRQAIEDVAQKKQDSEVLEEAIRVILRIAKESRQAIRAVAEIAKEAQ-DSEVLEEAIRVILRIAKESGSEEALRQAIRAVAEIAKEAQD-PRVLEEAIRVIRQIAEESGSE---------EARRQAERAEEEIRRRAQ------------------------------------------------------------------- |
2 | 6r7oA3 | 0.14 | 0.08 | 2.74 | 0.90 | FFAS-3D | | --SKEDLLVLRKTVKSFLAVCQQ------------CLSNVNTPVKEQAFMLLCDLLMIFSHQLMTGREGLQPLVFNPD--TGLQSELLSFVMDHVFIDQEANKIEALAAFSKLIIYDIVDMHAAADIFKHYMKYYND-------------------YGDIIKETLSKT-------------------------------------------------------------------- |
3 | 4fz4A | 0.12 | 0.06 | 2.25 | 0.28 | HHpred | | AMKVEEVQKVVKELEKELGELDKVPSYGAQDYSYDNMDYASKKFFHKVKGDLNDFKIKVENYIRQVAELRK--KYPGD------NTIEEEYNAHLKDEGKSIEGATLRDYVDEAS---EAMGRIKQRVAELEILEHH--------------------------------------------------------------------------------------------------- |
4 | 6gaoA | 0.11 | 0.10 | 3.55 | 0.79 | MUSTER | | --HMEEIKKQVQVNVDDIRAANIK---------DGLGRQIA--DISNSISTIESRLGEMDNRLVGISSQVTQLSNSVSQNTQSISSLGDRINAV---EPRVDSLDTVTSNLTGRTSTEADVGSLRTELAALTTRVTTEVTRL----DGLINSGQNSIGELSTRLSNVETSMVTTAGRGLQKNGNTLNVIVGNGMWFNSSNQLQLDLSGQSKGGFVGTGMVVKIDTNYFAYGEITLV |
5 | 2nrjA | 0.10 | 0.06 | 2.02 | 0.60 | CNFpred | | --LPGRIVQDQKNARAHAVTWDT-----------------------KVKKQLLDTLNGIVEYDTTFDNYYETMVEINTGDGETLKEGITDLRGEIQQNQAQQLIEELTKLRDSIGHDVRAFGSNKELLQSILKNQ--------------GADVDADQKRLEEVLG----------------------------------------------------------------------- |
6 | 2pffB | 0.17 | 0.15 | 4.86 | 0.55 | HHsearch-2 | | QETLVKTKELIKNYILVGDLIRTEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAYVVTAKLLGFTPGELRS-------YLKGAIAETDSWES--FFVSVRKAITV---LFFIGVRCYE------------AYP----NTSLPPSIEDSLENNEGVPSPMLSISSHLPAGKQVEISGAKNLVVSGPPQRKA-------KAPSGLDQSRIPFSERKLKFSNRFLPVA |
7 | 5nnvA | 0.06 | 0.06 | 2.36 | 0.83 | Neff-PPAS | | --EELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTEKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESSSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTTLL---------------------------- |
8 | 1vt4I3 | 0.13 | 0.11 | 3.70 | 0.98 | HHsearch | | EY---ALHRSIVDHYNIPKTFDSDPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQK-----IRHDWNASGSILNTLQQLKFYKPYICDN-----DPKYERLVNAILDF---LPKIEENCSKYTD-------------LLRIALMAEDEAIFEEAHKQVQRGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGG- |
9 | 6fmlG | 0.08 | 0.08 | 3.05 | 0.62 | SP3 | | GRLDKPGPGNLVAGFRSKYLNHMMNIWTPENIRSSLEGIENFTWLRFV--DTSLQEAYRASHTDVFARAVDLASKQNRLGHMQIVYDEPEDKKWTPVHALFQICERENPKAVAEITTEGVLRDLMNIARVKYRELGLCRLEKAARPRASAPPIEVVCDSRSAVIERENIMFHPAMRKALFGPTPSEIKEASFGPRPVTLYPPRALLPAPDHDKQRFTNITVPSMARFVTDSGLAKL |
10 | 2mxxA | 0.06 | 0.05 | 2.02 | 0.93 | PROSPECTOR2 | | MADE-----------------ATDAARNNDGAYYLQTQFTNADKVNEYLAQHDGEIRAEAAADPAVVAAKAALDAVEGGSHNYGEVKAAY---------------------------EAAFNNAFNAVRNKYVQRFQATYNNATEQEGKTYIQGETPEQANA------RYLKRVGAANNQNPAAEDKGATTPASKEEAKKSEAAAKNAGKAAGKALPKTSAVKHHHHH-------H |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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