Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | ILTRPKEPEFVTAQRVRPTRVKSSAELEEEMMAKIPKFKARPLNKKILEVPTLPALPKSTPQLPEFKEFHLQTMARANQNAETSTVASIDSTQSHQWKSLHLTAPTSPVLKTSLRGRPPRIRSSKEMEKEELEKVPKFKARPLNKKIFESKGDLGMFCNTKRQVTVPQEFHF |
1 | 3rj1C | 0.08 | 0.07 | 2.71 | 1.42 | SPARKS-K | | RRLAQLTHSLRRIRDESKAELPQWYTLQSQLNVTLSQLVTSTLQHFQETLDSTVVYPLPKFPTTS-HESLVTTLLRKKNIPEVDEWKYVRETSGVTTALL---------------KDEEIEKLLQQDREITNWARTT-----FRNEYGKHDPDVLKFTFTGEK--------- |
2 | 4ke2A | 0.07 | 0.07 | 2.88 | 1.59 | Neff-PPAS | | AVTAADAAAAAATIAASAASVAAATAADDAAASIATINAASAAAKSIAAAAAMAAKDTAAAAASAAAAAVASAAKALETIVKAAYAAATTANTAAAAAAATATTAAAAAAAKATIDNAAAAKAAAVATAVSDAAATAATAAAVAAATLEAKAAATAVSAAAAAAAAAIAFAA |
3 | 5dfzB | 0.08 | 0.08 | 3.00 | 1.42 | SPARKS-K | | WKKIITNHVDSFGNNRIEFITKSTVYSHDNKEIPLTA----EDRNWIDKFHIIGLTEKDIWKIVALRGVIRTARVMAANPNLKNVFVQLEPTSYHMHSPNHGLKDNANVKPERKVVVSNSYEGDVESIEKFLSTFKI---LPPLRDYKEFGPIQEIVRSPNMGNLRGKLIAT |
4 | 2ftcA | 0.08 | 0.07 | 2.76 | 0.50 | FFAS-3D | | -LSLPENASEVKIAEENGAAFAGGTSLIQKIWDDEIVADFYVAVPEIMP-ELNRLRKKLNKKYPKLSRNSIGRDIPKM------------LELFKNGHEIKVDEERENFLQTKIATLDMSSDQIAANLQAVINEVCRHRPLNLGPFV------VRAFLRSSTSEGLLLKID- |
5 | 2pffB | 0.13 | 0.13 | 4.40 | 0.23 | HHpred | | -----SQGLVTAVAIAETDSWESFFVITVLFFIGVRCYEAYPLPPSILEDEGVPSPMLSISNLPAGKQVEISLVNGAKNLVVSGPPQSLKAPSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDLINKDKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVDC---- |
6 | 4k0mC | 0.09 | 0.09 | 3.51 | 0.97 | MUSTER | | DETVEVHAKLGIDPRRSDQNVRGTVSL-PHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
7 | 2pffB | 0.14 | 0.14 | 4.77 | 0.97 | HHsearch-2 | | GATGHSQGLVTAVAIAETDSWESFFVITVLFFIGVRCYEAYPLPPSILEDEGVPSPMLSISHLPAGKQVEISLVNGAKNLVVSGPPQSLKAPSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDLINKDKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISEATHILDFGP |
8 | 2tmaA | 0.06 | 0.06 | 2.56 | 1.56 | Neff-PPAS | | --AEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELE |
9 | 4btgA3 | 0.16 | 0.15 | 5.01 | 0.44 | HHsearch | | RLWSPSTPKFMVKQRGRAEVIFSDEELFIEAMSEVSPFKLRPINETTSYIGQTSAHMGQPSHVVVYEDWQFAKEITAFTPVKLASRMSLAPIGFPSVVERDYALDRDPVASLEARA-SNDL---KRS-------MFNYYAAVMHYAV-AHNPEVVVSEHQGVALRIPVGYN- |
10 | 4pysA2 | 0.11 | 0.10 | 3.54 | 0.72 | SP3 | | WDKCP-----DCRSRIEKEKLKDSHDLQLWFSARADYLKQKGRKGDVIYKDGYSLPDNVVIQWWNWRGHRDLALKNAVRHTNYYTYLNFPLTPWKGYTQARTFDLENPSYRPREENPSGNPENFDEFYGKVLSKQLWYSFGPALKEDAGTNYKWD----------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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