Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | IEQHELITRGIGYLNRPKDVTPKDGDPFLSCSIAALAGPVDEPEYRYFDTIVATPEAEHLVRRCVQAIEGDRKVLIAFRLNDMKIDPYIRTKGEHAGEPAASLESTLVHIGLIKIDGTQVYPTSQAH |
1 | 3pgzA | 0.18 | 0.14 | 4.63 | 0.75 | SPARKS-K | | -AGSLNKVILIGNLGAPEIRRLNSGDQVANLRIATSESWRDRERTEWHNIVIFNE---NLVKVVEQYLKKGSKIYIEGQLQD--------QNGNDRYTTEIVLQKYRGELQMLD------------- |
2 | 2iheA1 | 0.21 | 0.16 | 5.02 | 0.56 | FFAS-3D | | LNQVFL----IGTLTARPDMRTPGGLAILDLNLAGQDAFTDEEVPWYHRVRLLGRQA----EMWGDLLEKGQLIFVEGRL--------EYRQWEKDGEKKSEVQVRAEFIDPL-------------- |
3 | 3tqyA | 0.14 | 0.10 | 3.51 | 0.37 | HHpred | | -----NKVILIGNLGQDPEVYTPNGNAVANVTLATSTTWRDKERTEWHRIAFFNRLAEIVG----EYLRKGSKIYIE---GSLRTRKWQDKN----GVDRYTTEIIANEHL---------------- |
4 | 3pgzA | 0.18 | 0.14 | 4.63 | 0.82 | MUSTER | | L-----KVILIGNLGAPEIRRLNSGDQVANLRIATSE-RDRKERTEWHNIVIFN---ENLVKVVEQYLKKGSKIYIEGQL---QTRKWQDQNGNDR--YTTEIVLQKYRGELQMLD----------- |
5 | 2cwaA | 0.13 | 0.09 | 3.28 | 0.71 | CNFpred | | -----NQVFLMGNLTRDPELRYTQGTAVARLGLAVNER----ERTHFVEVQAWRDLAEWAA-----ELRKGDGLFVIGRLV---NDSWTSSS----GERRFQTRVEALRLERP-------------- |
6 | 5xgtA | 0.12 | 0.09 | 3.33 | 0.53 | HHsearch-2 | | LNR----VVLVGRLTKDEYRTTPSGVSVATFTLAVNRTFTNEREADFINCVVFRRQADNVNN----YLSKGSLAGVD---GRLQSRNYENQE----GRRVFVTEVVCDSVQFLE------------- |
7 | 1s3oA | 0.08 | 0.06 | 2.49 | 0.72 | Neff-PPAS | | ------RVHLLGRVGQPVLRQVEGKNPVTIFSLATNEMWRSDVSQKTTWHRISVFR-PGLRDVAYQYVKKGSRIYLEGKIDY-------GEYMDKNNVRRQATTIIADNIIFLS------------- |
8 | 5xgtA | 0.13 | 0.10 | 3.55 | 0.70 | HHsearch | | --ML-NRVVLVGRLTKPEYRTTPSGVSVATFTLAVNRTFTNEREADFINCVVFRRQADNVN----NYLSKGSLAGVD---GRLQSRNYENQE----GRRVFVTEVVCDSVQFLE------------- |
9 | 5odnA | 0.14 | 0.10 | 3.50 | 0.88 | SP3 | | VN----KVILIGNLGDPELRYTGSGTAVCNMSLATNET-----NTEWHDVVAWGRLGEICNEYLD----KGSQVYFEGKL---QTRSWE----DRDNNTRYSTEVKAQEMMFL-------------- |
10 | 2hqlA | 0.12 | 0.10 | 3.58 | 0.53 | PROSPECTOR2 | | MLN---RVFLEGEIESSCW---SVKKTGFLVTIKQMRFFGERLFTDYYVIYANGQLAYELEKHT----KKYKTISIEGIL-----RTYLERKSEI--------WKTTIEIVKIFNPKNEIVIDYKEI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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