>PF12094 (422 residues) ASLAAAACALLNSAVQAQENTQANEWQFDTAILYYGETDRVQLGEGVFNAKKDFGDEHIF NGKIAIDTLTGASASGAVAQQGVQTFTRPSGNGQYVVNAGETPLDDTFKDTRVQLSAQWT QPLWENITGSTGVHLSKEYDYLSLGVNGSLARDFNQKNTTLSAGVSYQYDSIDPVGEAPT GLSPMVVNNGQFSDESAFETAFNATRATDSKDKNTVDLLLGVTQVINRRMLMQFNYSYSI ADGYLTDPYKLLSVVNTEGVTQDILHENRPDKRTKQSFYWQTKYASDYGIADVSYRYATD DWDIDSHTLDSRFRVKLSDNSYIQPHFRYYQQSAADFYQPFLIQGSLLPSVASADYRLGE MTAYTIGLKYGQALDNGREWAVRLEYYQQSPKNAGFEEPGALQGLDLYPSIDAIIAQVSY SF |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | ASLAAAACALLNSAVQAQENTQANEWQFDTAILYYGETDRVQLGEGVFNAKKDFGDEHIFNGKIAIDTLTGASASGAVAQQGVQTFTRPSGNGQYVVNAGETPLDDTFKDTRVQLSAQWTQPLWENITGSTGVHLSKEYDYLSLGVNGSLARDFNQKNTTLSAGVSYQYDSIDPVGEAPTGLSPMVVNNGQFSDESAFETAFNATRATDSKDKNTVDLLLGVTQVINRRMLMQFNYSYSIADGYLTDPYKLLSVVNTEGVTQDILHENRPDKRTKQSFYWQTKYASDYGIADVSYRYATDDWDIDSHTLDSRFRVKLSDNSYIQPHFRYYQQSAADFYQPFLIQGSLLPSVASADYRLGEMTAYTIGLKYGQALDNGREWAVRLEYYQQSPKNAGFEEPGALQGLDLYPSIDAIIAQVSYSF | |||||||||||||||||||
1 | 1fepA | 0.12 | 0.10 | 3.55 | 1.25 | SPARKS-K | EVLRGPAAARYGNGAAGKKGSGEWHGSWDAYFNAPEHKEEGATKRTNFSLTGPLGDEFSFRLYGNLDKTQADAWDI--NQGHQSARYATTLPAGREG------------VINKDINGVVRWDFAPLQSLELEAGYSRQETNRLYRQNYALTWNGGWNGVTTSNWVQYEHTRNSRIPE----------------------------GLAGQDFVDIDLDDVLHSEVNLPNQTLTLGTEWNQQR--------------KDLSSNTQADRSPYSKAEIFSLFAENNELTDSTIVTPGLRFDHHSIVGNNWSPALNISQGLGDDFTLKGIARAYKAPSLYQTNPNYILYSKGQGCYLGNDDLKAETSINKEIGLEFKRDG-WLAGVTWFRNDYRNKGYVAVGQ-NAVGTDLYQKAVVEGLEGSLNV | |||||||||||||
2 | 3dwoX | 0.13 | 0.12 | 4.00 | 1.15 | FFAS-3D | ---NTAGWGRAMAGGSLFPN--------DPSAAFNNDKRIAQLTVNYADI----------DIKYNGDAYDYQGNPMTGGYQDGPGTPELG-----------TNDGGQAGFGAWLPTGFLVVPINDRFAFGLSMGMRSTWDIETIGLTGSLSFKVNDN-FSLGAGVIIQRTSGFVSQNLDLYASAANSPGMGGIPFPASNSSALMRVK---VDNTSPGFFAGAVWKPTDR----DTLGFAYHAKIRNKLKGHYNLYDHDGGLTEGAIEDIPA---YASLDWVHQ-FNDRLSLGASATWT--EWSSNTWTLAVGGDYKVTDQWTMRAGVA-YDQTPT------------HNATRDPRIPDGDRYFASLGAGYRFQSMPELSIDAAYSRQFVKEVPLKTVNQDRLGGGRLDGRATSKGLSATYDF | |||||||||||||
3 | 3dwoX | 0.12 | 0.10 | 3.55 | 1.16 | MUSTER | WGRAMAGGSLFPNDPSAAFN-FIDKRIAQLTVNYADID--IKYNGDAYD--------------------------------YQGNPMTGGYQDGPGTPELGTNDGGQAGFGAWLPTGFLVVPINDRFAFGLSQVVPM-STWETIGLTGSLSFKVNDN---FSLGAGVIIQRTSGFVSQNLDLYASAANSPGMGGIPFPASNSSALMRV-KVDNTSPGFFAGAVWKPTDRDTLGFAYHAKIR----NKLKGHYNLYDHDGGLTGTPGLAYPGLDLRMGASASARLDIDRLSLGASATWTE-TYR-NTWTLAVGGDYKVTDQWTMRAGVAYDQ--------TPTHNATRDPRIPDGDR-----YFASLGAGYRFQSMPELSIDAAYSRQFVKEVPLKTVNQDRLGGGRLDGRAKGQVFSLSATY | |||||||||||||
4 | 3qlbA | 0.10 | 0.07 | 2.71 | 1.85 | CNFpred | ---------------------------------------DRTQYSLGYLLEHRLNDVWSLNSSARYGH------------------------------------------VNLLTNTASGMSLADLRTLNRAAYRFR-IVGDTYSLDNNAQARWNSTQMVSLLGIDYRRTREDYYLRG-GSASPIDIYNPVHHGVFDPST----PFTNTVQRADQVGVYAQQQFTFDEHWVLTVGGRQDR---------SSARTDNRMNDSGSKQDD------EKFTYRTGLVYLADGLAPYISYSTSFDPVPTSAKQSEVGVKYQPP-GIDSYITLSLFDLTQENVLTTDP-------AQRLNKIQTGEINVRGIELEGKASLARGLDLLAALTYNDAEVS-NNPLEKGKRPT---DTPEKMASLWADYTL | |||||||||||||
5 | 3dwoX | 0.10 | 0.09 | 3.21 | 1.60 | Neff-PPAS | ----PAAMAFI------------DKRIAQLTVNYADIDIKYNGDAYD----------------------------------YQGNPMTGGYQDGPGTPELGTNDGGQAGFGAWLPTGFLVVPINDRFAFGLSQVVPMGTKIETIGLTGSLSFKVNDN---FSLGAGVIIQRTSGFV-SQNLDLYASAANSPGMGGIPFPASNSSALMRVKVDNTSPGFFAGAVWKPTDRDTLGFAYHAKIRNKLKGHYNLYDHDGGLTEGAIEGGTPGLAYPGLDLRMGASASARLDRLSLGASATWTEWTYR-NTWTLAVGGDYKVTDQWTMRAGVAYDQ-------------TPTHNATRDPRIPDGDRYFASLGAGYRFQSMPELSIDAAYSRQFVKEVPLKTVNQDRLGGGRLDGRATSKGQVFSLSA | |||||||||||||
6 | 5mzsA | 0.09 | 0.08 | 3.20 | 1.53 | PROSPECTOR2 | EETKQASRNSVRYGWRGERDSRGDTNNLSVYSNFPQHKAEGASERMSFGLNGPLTENLSYRVYGNIAKTDSDDWDINAGHESNRTGKQAGTLPAGREYTGDTQNTNSNRMYRETYSVTHRGEWDFGSSLAYLQYEFYTATLRDLTAHGEVNLPLHGYEQTLTLGSEWTEQKLDDPSSNTQNTEEGGSIPGLAGKN-------RSSSSSADIVGDNWSPSLNLSHALTERVTLKAGIARAYKAPNLYQLNPDYLLYSAGAGCYGQSTESGLSPVDHASGGKGDYANAAIYQWELTLPL-ADGLKWSNYTLNSMLDWQATDDLSLQATVTWYGKQKPKKYDYHGDRVTGSANDQLSPY-------AIAGLGGTYRLSKNLSLGAGVDRLFRAGNAQGVVGIDGAGAATYNEPGRTFYTSLTASF | |||||||||||||
7 | 5mzsA | 0.06 | 0.06 | 2.52 | 1.23 | SPARKS-K | EVIRGPAAARYGNGAAGKQAGAETHGNLSVYSNFPQHKAEGASERMSFGLNGPLTENLSYRVYGNIAKTDSD--DWDINAGHESNRTQAGTLPAGREG-----------VRNKDIDGLLSWRLTPEQTLEFEAGFSRQETNRMYRETYSVTHRGEWDFGSSLAYLQYEKTRNSRIN--------------EGLAGGTEGIFDPNNAGFYTATLRDLTAHGEVNLPLHYEQTLTLGSEWTEQKLDDPSSNEGGSILAGKNRSSS-------SSARIFSLFAEDNIELPGTMLTPGLRWDHHDIVGDNWSPSLNLSHALTERVTLKAGIARAYKAPNLYQLNPSAGAGCYGQYLRGNDGLKAETSVNKELGIEYSHD-GLVAGLTYFRNDYKNSGLSPVDHASGGKGDYANAAIYQWENVPKAV | |||||||||||||
8 | 2r4nA | 0.10 | 0.08 | 2.84 | 1.10 | FFAS-3D | -SSSGLGRAYSGEGAIADDATMFDRPTFSAGAVYIDDNIAPTAWVPNMHFVAPINDQFGWGASIT---------------------SNYGLATEFNDTYAGGSVGGTTDLETMNLNLSGAYRLNNAWSFGLGFNAHLNGNQWGFGWNAGILYELDKN---NRYALTYRSEVKIDFKGN----YSSDLNRAFNNYGLPIPTATGGATQSGYLTLNLPMWEVSGYNRVDPQWAIHYSLAYT-----SWSQFQQLKATSTSG----------------------------DTLFQKHEGF------KDAYRIALGTTYYYDDNWTFRTGIA-FDDSPVP--------------AQNRSISIPDQDRFWLSAGTTYAFNKDASVDVGVSYMHGQSVKINEGPYQFESEG----KAWLFGTNFNYAF | |||||||||||||
9 | 2r4nA | 0.11 | 0.09 | 3.42 | 1.11 | MUSTER | SGLGRAYSGEGAIADDAGN--MFDRPTFSAGAVYIDPDVNISGTSPSGRSLKADNIAPTAWVPNMHFVAP---------INDQFGW----GASITSNYGLATEFNDTYAGGSVGGTTDLETMN---LNLSGAYRL---NNAWSFGLGFNAVYA------RAKIERFAGD-LGQLVAGQIMQSPAGQTQQGQALAATANGIDSNTKTAHLNGNQWGFGWNAGILYELDKNNRYALTYRSEVKIDF-----GNYSSDLNRAFNNYGLPIPTATGGATQSGYLTLNL--PQWAIHYSLAYTS-GFK-DAYRIALGTTYYYDDNWTFRTGIAFDD--------SPVPAQNRSISIPDQDR-------FWLSAGTTYAFNKDASVDVGVSYMHG------QSVKINEGPYQFESEGKAWLFGTNFNY | |||||||||||||
10 | 1xkwA | 0.10 | 0.09 | 3.29 | 1.84 | CNFpred | --------------------------AAYEDRDYFYDVADQGTRLLYGVTEFDLSDTLLTVGAQYQHIDSITNMAGVPMAKDGSNLGLSR--DTYLDVD-----WDRFKWDTYRAFGSLEQQLGGGWKGKVSAEYQEADKFKSIQRSLDANLNGP-LTHELLGGVTYAQGETRQDTARFLNLPNTPVNVYRWDPHGVPRPQIGQYTSPGTTTTTQKGLYALGRIKLAEPLTLVVGGRESWWDQDTP---ATRFKP---------------GRQFTPYGGLIWDFARD-WSWYVSYAEVYQP-PVEGKTYETGIKGELA-DGRLNLSLAAFRIDLENNPQEDP--DHPGPPNNPFYISGGKVRSQGFELEGTGYLTPYWSLSAGYTYTSTEYLKDSQNDSGTRYSTF--TPRHLLRLWSNYDL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |