Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MQIHTLDKASIINELQFGTGINHAVHEGRRADFALILSMFSDDVRDNTPVEKIEQPELTENVLRQRFELPEPQPLRSDQSSYDISATQASLFHSAGLPSAKLSHYLKPDALTYLPEDTHDLPEEVYHNLSGHQRRQLGEKEPKQLMPADLYNKLISAQRSFQI |
1 | 2mhkA | 0.08 | 0.07 | 2.71 | 0.70 | SPARKS-K | | INWQLLAIRALVKEGKT-GQAVELFNQAQRREKTLLAVEIKLA-------------QKDFAGAQNLLAKITPADL--EQNQQARYWQAKIDASQGSIDLLRALIAQEP---LLGAKEKQQNIDATWQALSSMTQEQANTLVINADELQGWLDLQRVWFDNRND |
2 | 1p7mA | 0.06 | 0.06 | 2.36 | 0.64 | FFAS-3D | | ----------ETDSKKLFEMICLEGQQA-GLSWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQ---DAGIIRHRGKIQAIIGNARAYQNGEPFADFVWSFVNHQPQMTQATTLSEIPTS--TPASDALSKALKKRGFKFVGTTICYSFMQAC------ |
3 | 5bvrA1 | 0.18 | 0.10 | 3.19 | 0.20 | HHpred | | ----------------------------------------------------------TFTKWFNTRDLPSVFDLRKDL--------------SDGILLIQLLEIIGDENLGRYN-RNPRMRVHRLENVNKALEYIKKGMPLTNIGPADIVDILGTLLRFT-- |
4 | 5cwjA | 0.13 | 0.12 | 4.06 | 0.70 | MUSTER | | -DSEEE-------QERIRRILKEARKSGTEESLRQAIEDVAQLAKKSQDSEVLEEESGSEEALRQAIRVAEIAKEAQDSEVLEEAIRVILRIAKESGSEEALRQAI--RAVAEIAKEAQD--PRVLEEA-IRVIRQIAEESGSEEARRQAERAEEEIRRRAQ- |
5 | 5h7cA | 0.10 | 0.08 | 2.98 | 0.65 | CNFpred | | --------------IEIVKELAELAKQSDSELVNEIVKQLAEVAKEATDKELVI---YIVKILAELA-----KQSTDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTDS-ELVNEIVKQLEEVAKEA-----TDKELVEHIEKILEELEQQSAF |
6 | 1vt4I3 | 0.11 | 0.09 | 3.08 | 0.76 | HHsearch-2 | | -----------------EYALHRSIV----DH-YNIPKTFDSDDLIPPYL-----DQYFYSHIGHHLKNIEHPTLRMVFLDFRFLEQK-----------IRHDSTAWNASGSILN-TLQQLKFYKPYICDNDPKDFLPKIELICSKYTDLLRIAEEAHKQVQR |
7 | 3i9wA2 | 0.10 | 0.10 | 3.62 | 0.68 | Neff-PPAS | | -----QEQEISRSLRQQGELVGQRLQLRQQQQLSQQIVAAADEIARLAQGQANNATTSAGATQAGIYDLIEQAAESALDRLIDIDLEYVNQMNELRLSALRVQQMVMNLGLEQIQKNAPTLEKQLNNAVKILQRRQIREDPGVRAQVATTLTTVSQYSDLLAL |
8 | 1k4uP | 0.16 | 0.03 | 1.02 | 0.31 | HHsearch | | ---------------------------------------------------------------------------------------------------------SKPQPAVPPR----PSADLILNRCSESTKRKLASAV---------------------- |
9 | 5cwjA | 0.12 | 0.11 | 3.90 | 0.62 | SP3 | | ------DSEEE--QERIRRILKEARKSGTEESLRQAIEDVAQLAKKSQDSEVLEEESGSEEALRQAIRVAEIAKEAQDSEVLEEAIRVILRIAKESGSEEALRQAIR----AVAEIAKEAQDPRVLEEA-IRVIRQIAEESGSEEARRQAERAEEEIRRRAQ- |
10 | 2liga | 0.08 | 0.07 | 2.72 | 0.58 | PROSPECTOR2 | | MGGLLFSSLQHCQQGVISNELRQQQSELTSTWDLMLLSRSAARMMMDASNQQSSAKTDLLQNAKTTLAQAAAKNMTPLPAMAEASANVDEKYQRYQAALAELIQFLDNG------------NMDAYFAQPTQGMQNALGE-----ALGNYARVSENLYRQTFD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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