>PF11992 (314 residues) LPWLIFALCFAMLPHLFNQPPWVVAMAALAMGWRALAHWGRMPMPGRWLLVLLTLVATGL VVTQYGTLFGRDAGVALLILMTGLKLLETRGFRDAMLGIFLGYFVVITNFFYSQEIPLAL YMVAAVFATTAALVRLNAGDGAQPWRESLSLAGLMLAQALPLMIILFLLFPRLPGPLWGM PQDESAGITGLSDSMSPGSISDLLQSDAPAFRVSFAGDIPDQNLRYWRGPVFWEYDGRTW RFGRDRGEAPPQPVAIDEDDTFTYTVNLEPHDGRWLLALDIPLTTPQDARMTADHDLVSR RPVRSLIQYSVSSL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | LPWLIFALCFAMLPHLFNQPPWVVAMAALAMGWRALAHWGRMPMPGRWLLVLLTLVATGLVVTQYGTLFGRDAGVALLILMTGLKLLETRGFRDAMLGIFLGYFVVITNFFYSQEIPLALYMVAAVFATTAALVRLNAGDGAQPWRESLSLAGLMLAQALPLMIILFLLFPRLPGPLWGMPQDESAGITGLSDSMSPGSISDLLQSDAPAFRVSFAGDIPDQNLRYWRGPVFWEYDGRTWRFGRDRGEAPPQPVAIDEDDTFTYTVNLEPHDGRWLLALDIPLTTPQDARMTADHDLVSRRPVRSLIQYSVSSL | |||||||||||||||||||
1 | 6g49A | 0.36 | 0.14 | 4.27 | 1.41 | SPARKS-K | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTGLSESMAPGDIAELGRSAELAFRVRFEGALPPREQLYWRALTMERFDGRRWAQAPQWSGEDALH-WQKRGPELRYDVIMQPSSQPWLFALDVAQTDQTDTRLMSDFHLQRRQPVEQRLFYRVSSW | |||||||||||||
2 | 3rkoB | 0.09 | 0.05 | 1.93 | 1.16 | CNFpred | WATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHA-----ATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVIEQNIFKMGGLSIPLVYLCFLVGGAALSALPLVTAGFFSK-------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
3 | 6g49A | 0.36 | 0.14 | 4.27 | 1.33 | FFAS-3D | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTGLSESMAPGDIAELGRSAELAFRVRFEGALPPREQLYWRALTMERFDGRRWAQAPQWSG-EDALHWQKRGPELRYDVIMQPSSQPWLFALDVAQTDQTDTRLMSDFHLQRRQPVEQRLFYRVSS- | |||||||||||||
4 | 6eznF | 0.07 | 0.06 | 2.68 | 0.95 | Neff-PPAS | IMHATCAALFYFYMVSAWGGYVFITNLIPLHVFLLILMGRYSSKLYSAYTTWYAIGTVASMQIPFVGAFFFDTHFLIWLFPAGVFLLFLDLKDEHVFVIAYSVLCSYFAGVMVRLMLTLTPVICVSAAVALSKIFDIYLDFKIKPAALLAKLIVSGSFIFYLYLFVFHSTWVTRTAYSSPSVVLPSQTKLALIDDFREAYYWLRMNSDADRTTLVDNNTWNNTHIAIVGKAMASPEEKSYEILKEHD--------------VDYVLVIFGGLIGFGGDINKFLWMIRISEGIWPEEIKERDFYTAEGEYRVDAR | |||||||||||||
5 | 6g49A | 0.36 | 0.14 | 4.27 | 4.33 | HHpred | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTGLSESMAPGDIAELGRSAELAFRVRFEGALPPREQLYWRALTMERFDGRRWAQAPQWSGED-ALHWQKRGPELRYDVIMQPSSQPWLFALDVAQTDQTDTRLMSDFHLQRRQPVEQRLFYRVSSW | |||||||||||||
6 | 6g49A | 0.36 | 0.14 | 4.27 | 1.00 | MUSTER | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTGLSESMAPGDIAELGRSAELAFRVRFEGALPPREQLYWRALTMERFDGRRWAQAPQWSGEDALH-WQKRGPELRYDVIMQPSSQPWLFALDVAQTDQTDTRLMSDFHLQRRQPVEQRLFYRVSSW | |||||||||||||
7 | 6eznF | 0.09 | 0.09 | 3.32 | 1.29 | PROSPECTOR2 | SAGLLAAGFIAIVPGYNEAIAITLLMVTFMFWIKAQKTGSMGRYSSKLYSAYTTWYAIGTVPIRSNDHMAALGVFGLILFPAGVFLLFLDLKDEHVFVIAYSVLCSYFAGVMVRLMLTLTPVICVSAAVALSKIFDIYLDFKIKPAALLAKLIVSGSFIFYLYLFVFHSTWVTRTAYSSPSVVLPSQTKLALIDDFREAYYWLRDEDSKVATTLVDNNTWNNTHIAIVGKAMEEIKERDFYTAEGEYRVDARASKDFPQLFNGGQATDRVRQQMITPLDVPPLDYFDEVFTSENWMVRTKTRRSIKRPELGLRV | |||||||||||||
8 | 6g49A | 0.36 | 0.14 | 4.27 | 4.14 | HHsearch-2 | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTGLSESMAPGDIAELGRSAELAFRVRFEGALPPREQLYWRALTMERFDGRRWAQAPQWSGEDAL-HWQKRGPELRYDVIMQPSSQPWLFALDVAQTDQTDTRLMSDFHLQRRQPVEQRLFYRVSSW | |||||||||||||
9 | 6g49A | 0.36 | 0.14 | 4.27 | 4.76 | HHsearch | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTGLSESMAPGDIAELGRSAELAFRVRFEGALPPREQLYWRALTMERFDGRRWAQAPQWSGEDAL-HWQKRGPELRYDVIMQPSSQPWLFALDVAQTDQTDTRLMSDFHLQRRQPVEQRLFYRVSS- | |||||||||||||
10 | 4he8F | 0.15 | 0.08 | 2.78 | 1.09 | CNFpred | LAGLLLFLGAVGKSAQIPLMVWLPDAMAGPTPVSALIHA-----ATMVTAGVYLIARSSFLYSVLPDVSYAIAVVGLLTAAYGALSAFGQDIKKIVAYSTISQLGYMFLAAGVGAYWVALFHVFTHAFFKALLFLASGSV-HLPQTRWHALIGALALGGLPLLSGFWSKDAILAATLT---------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |