Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | VDVIAQKAVTGEELLRRKPIDTGRTTVVSESVAYSETNNIPEIKKPQDNVEPKQKENLGDKVRNIFGSMFD |
1 | 1zvoC2 | 0.05 | 0.03 | 1.32 | 1.14 | SPARKS-K | | --------------------GSLAKATTAPATTRNTGREEKKKEKEKEEQEERETKTPEC----------- |
2 | 2rmsB | 0.09 | 0.07 | 2.70 | 1.07 | MUSTER | | LSEAEMIALAGLLQMSQGEQTPNCVASSLPSTSCPDPVSVSEDPGPSGDQSCSGTDT-------------- |
3 | 6nuwJ2 | 0.08 | 0.07 | 2.83 | 1.18 | Neff-PPAS | | LETLIDALYKINDLLQQRLQILDDAIQEKTSELAEFENMVRS-----PSAGDNAIPGLLQIIQSYINLLEE |
4 | 1zvoC2 | 0.05 | 0.03 | 1.35 | 1.10 | SP3 | | ----------------GSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPEC------------- |
5 | 1vsy3 | 0.13 | 0.11 | 3.92 | 1.04 | SPARKS-K | | -------TSLLNERLQHYTLDYVSDRIYDPSSRWFSRSV--RPEFPIEEFLPYKTESHEDQAKYLCHVLVN |
6 | 6em3J | 0.06 | 0.04 | 1.87 | 0.37 | FFAS-3D | | ---------NNTKAMKHA---LERVQLPWKKHSFQEHQSVTS-ETNTDEHIKDIYDDTERELAFY------ |
7 | 1m4uA | 0.27 | 0.15 | 4.76 | 0.26 | HHpred | | -------------HIRPAP-----------------SDNLPLVEHPDPIFDPKEKDLNETLLRSLLGGHYD |
8 | 2p22D | 0.22 | 0.20 | 6.21 | 1.03 | MUSTER | | --------MNVEELLRRIPLYNKYGKDFPQETVTMPEFKLPALQPTRDLLCPEECDNITKVCQLHDSSKFD |
9 | 1y1uA | 0.09 | 0.06 | 2.13 | 0.43 | CNFpred | | --WQNRQQIRRAEHLCQQL--------------------------PIPGPVEEMLAEVNATITDIISALVT |
10 | 1m4uA | 0.26 | 0.17 | 5.21 | 0.44 | HHsearch-2 | | ----MQHYL----HIRPAP-----------------SDNLPLVEHPDPIFDPKEKDLNETLLRSLLGGHYD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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