Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | REALARLGLHALVRFDSVAPPEDGERRLYESLALLLENARPQLERLIADQQAQRQARQQSAARLIAELLIDCASCRRSVVSEAEQEQQAINELRKAVRQREQRCVEALLKLYAFRPQDAAASDLPLLDGRWGDDLFNPETLKQLGVRVGGGIAAGAAAGAGVDLLVGGLTLGAAALAGAIAGGALQTARSYGSRLMGKIKGQRELTVDDSVLRLLALRQRQLLHALNARGHAAMDSIQVATPQDKSWREGKLPEPLNKARAHPQWSSLNPYPKLSQAERQEQIEALA |
1 | 5k7vA | 0.13 | 0.10 | 3.64 | 0.86 | SPARKS-K | | -----------------------IEEVVAEMIDILAESSKKSIEELARAAEKAVAEAIEEIARLATAAIQLIEALAKNLAS-----EEFMARAISAIAELAKKAIEAIYRLAD----------------NHTTDTFMARAIAAIANLAVTAILAIAALAISAIAELAKKAIEAIYRLAAAIEAIALLATLAILAIALLASNHTTEEFMAKAISAIAELAKKAIEAIYRLAD--------NHTSPTYIEKEAIEKIARKAIKAEMLAKNITTEEYKREKAKEAIKRLE |
2 | 1cunA | 0.10 | 0.07 | 2.67 | 0.91 | FFAS-3D | | ---------------------FRDMDDEESWIKEKKLLVLTGVQNLRKKHKR-LEAELAAHEPAIQSVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRL--------------------------EESLEYQQFVANVEEEEAWINEKMTLVAS-----EDYGDTLAAIQGLLKKHEAFETDF--------------TVHKDRVNDVCANGEDLIKKNNHHVENIT---------------AKMKGLKG--KVSDLEK---AAAQRKAKLDENSA |
3 | 2pffB | 0.11 | 0.10 | 3.62 | 0.51 | HHpred | | -KFLGYVEPSKVGQFDQV------LNLCLTEFENCYLEG-NDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSDELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTLNIL--EWLENP-SNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLQGLVTAV-----AIASWESFFVSVLFIGVRCYEAYPNLPPSILEDEQVQDYVNKTNSHLPAGKQVEISLVNGAVVSGPPQSLNLTLRKAKSGLDQSRIPFSE--------------- |
4 | 1st6A | 0.09 | 0.09 | 3.42 | 0.70 | MUSTER | | DAWASKDTEAMKRALALIDSKMNQAKGWLRAGEQAIRQILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGLDLLTAKVENAARKLEAMTAKKIDAAQNWLADPNGGSEGCEEPKERDDILRSLGEISALTAKLSDLRRHGKGEARALAKQIATSLQNLQSKTNRAVANTRPVKAAVHLEGKIEQAQRWIDGVGQAAIRGLVAEGRRLANVMMGP-------YRQDLLAKCDRVDQAAQLADLAARGEGESPQARAIAAQLQ |
5 | 4f4cA | 0.09 | 0.07 | 2.63 | 0.76 | CNFpred | | NNRLRREFVKSILRQEISWFDTNLATKLFDNLERVKEGTGDKIGMAFQYLFITGFIVAFTHSWQLTLVMLAVTPIQALGFAIAKSMSTFAIRETLRYAKVVEETISSIRTVVSLN--------------------GLRYELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVH---------------GSLNFGDMLTTFSSVMMGSMALGLAGPQ--------------------LAVLGTAQG----------------AASGIYEVLD |
6 | 2pffB | 0.11 | 0.10 | 3.77 | 0.99 | HHsearch-2 | | AELVGKFEPSKVGQFDQV------LNLCLTEFENCYLEGN-DIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSDELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTLNIL--EWLENP-SNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLQGLVTAVASVRKAITVLFFIGVRCYEAYPEGVPMLSINLTQ----EQVQDYVNKTNSHLPAGKQVEISLVNGAVVSGPPQSLNLTLRKAKSGLDQSRIPFSEPFHVPA-SDLINKDL |
7 | 5cwqA | 0.13 | 0.10 | 3.52 | 0.89 | Neff-PPAS | | -------------------------EELERESEEAERRLQEARKRSEEARERGDLKELAEALIEEARAVQELARVACERGN-SEEAERASEKAQRVLEEARKVSEEAREQGD----------------------------------DEVLALALIAIALAVLALAEVACCRGNSEEAERASEKAQRVLEEARKVSEEAREQGDD-EVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEEQGDSEVKRLAEEAEQLAREARRHVQECRG |
8 | 6btmD | 0.07 | 0.03 | 1.43 | 0.55 | HHsearch | | ------------------------------------------------------------------------SNKVIYAIYND--------------DDVLMNAVKKTRAA-HHHIEEVFTP-FPVHG--LDKAMGLAPTRLAIC--AFLYGCVGISVATTMMSYIGGPIMFEMTVFFAAHLMVITFYMRSRPKNPRTTDDHFLIEVAVND-N--EAE----LVSFFEGTGA-VEVKVIEK---------------------------------------------- |
9 | 3i9wA | 0.10 | 0.08 | 3.12 | 0.69 | SP3 | | -----------------------PTMNMARQLSEASAWELFAAQNLTSADNEKMWQAQGRMLTAQSLKINALLQALREQGFDTTAIEQQEQEISRSLRQQGELVGQRLQLR---QQQQQLSQQIVAAADEIARLA--QGQANNATTSAGATQAGIYDLIEQDQRQAAESALDRLIDIDLEYVNQMNELRLSALRVQQMVMNLGLEQ-IQKNAPTLEKQLNNAVKILQRR---------QIRIEDPGVRA-QVATTLTTVSQYSQDSEISNHLQTLAQNNIAQFAQFS |
10 | 5cwmA | 0.12 | 0.10 | 3.41 | 0.91 | PROSPECTOR2 | | D-----------------------PEDELKRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVL---------EQAEKEGDPEVALRAVELVVRVAELLLRI----AKESGS-----------------EEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVE--LVVRVAELLLRIAKESGSEEA--------LERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQERVKELR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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